DRSC/TRiP Functional Genomics Resources

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Protein Alignment LARP4 and Larp7

DIOPT Version :10

Sequence 1:XP_047284158.1 Gene:LARP4 / 113251 HGNCID:24320 Length:738 Species:Homo sapiens
Sequence 2:NP_524795.2 Gene:Larp7 / 44900 FlyBaseID:FBgn0260771 Length:595 Species:Drosophila melanogaster


Alignment Length:674 Identity:133/674 - (19%)
Similarity:216/674 - (32%) Gaps:196/674 - (29%)


- Green bases have known domain annotations that are detailed below.


Human   110 PEDLSYQIYDVSGESNSAVSTEDLKECLKKQLEFCFSRENLSKDLYLISQMDSDQFIPIWTVANM 174
            |||.|....| .|....    ..|...::.|:||.|...|||||.:|...::.|.::|:......
  Fly    41 PEDASPDKKD-GGRKRK----RHLFNSIRGQMEFYFGDANLSKDRFLRRYVEQDPYVPLEIFLTF 100

Human   175 EEIKKLTTDPDLILEVLRSSPMVQVDEKGEKVR-----PSHKRC---IVILREIPETTPIEEVKG 231
            .:||.||.|...|.:.|.:|.::::||...||:     |..:..   .:.:..:|.....:.:|.
  Fly   101 NKIKTLTQDVQQIAKALSNSQLLELDETELKVKRRTKLPDQRDVNDKTLYVEALPANATHDWLKE 165

Human   232 LFKSENCPKVISC----------EFAHNSNWYITFQSDTDAQQAFKYLREEVKTFQGKPIMARIK 286
            :|........:|.          |||     :|.|:.....::|       ||.|      |:|:
  Fly   166 VFSRYGPVAYVSLPHYPGTKKIKEFA-----FIEFEKSGSLEKA-------VKAF------AQIQ 212

Human   287 AINTFFAKNGYRLMDSSIYSHPIQTQAQYASPVFMQPVYNPHQQYSVYSIVPQSWSPNPTPYFET 351
            .:.:                  ::|     .|..:..|.:..||..:.....|       |..|.
  Fly   213 GVLS------------------VET-----DPSDLASVRSFQQQQQIQQKAEQ-------PQSEA 247

Human   352 PLAPFPNGSFVNGFNSPGSYKTNAAAMNMGRPFQKNRVK-----PQFRSSGG---SEHSTEGSVS 408
            .....|..:.          |..|...:.....:..|||     |...|:.|   ||...||:..
  Fly   248 EQVELPKRNL----------KREATDKDREEIHEVKRVKLEEGQPSETSTAGETASETDAEGTAE 302

Human   409 LG---------DGQ---LNRYSSRNFPAERHNPTVTGHQEQTYLQKETSTLQVE----------Q 451
            ..         ||.   ..|...|...|....|.:           |.|.|:::          :
  Fly   303 ASEQEDKTEATDGDEAAKKRRRKRKKKAIVDKPNI-----------EPSALELKVLPKTSWSSMR 356

Human   452 NGDYGRGRRTLFRGRRR--REDDRISRPHPSTAESKAPTPKFDLLASNFPPLPGSSSRMPGELVL 514
            |......||.:...:.:  ||:...::.||...::..|         |.|    ..|::| |.|.
  Fly   357 NKYLNLQRRIVSEAKSKLWRENHPQNQQHPHHQQTSHP---------NHP----KPSQLP-EAVK 407

Human   515 ENRMSDVVKGVYKEKDNEELTISCPVPADEQTECTSAQQLNMSTSSPCAAELTALSTTQQEKDLI 579
            |....    |.......|....:.||||..:   .:..::||:.......|.|......||:   
  Fly   408 EEETG----GEVPSDGGEGAVEAAPVPAKRR---KAVHKMNMNFYGAGGVESTKSEEPSQER--- 462

Human   580 EDSSVQKDGLNQTTIPVSPPSTTKPS---RASTASPCNNNINAATAVALQEPRKLSYAEVCQKPP 641
                             :|....:|.   ..|...|| .|:....|...|.| .:.|.::     
  Fly   463 -----------------TPLFKYEPGLIVECSLLKPC-TNVKEFKAEMRQYP-DIKYVDI----- 503

Human   642 KEPSSVLVQPLRELRSNVVSPTKNEDNGAPENSVEKPHEKPEARASKDYSGFRGNIIPRGAAGKI 706
            ||...|.:..|.       :|...|:.....|..|        |..|..||.:..:..|    ||
  Fly   504 KEGDQVALLRLG-------TPAAAEELLRQVNCSE--------RQLKVLSGQQETLYWR----KI 549

Human   707 REQRRQFSHRAIPQGVTRRNGKEQ 730
            .:.|.....:.:  .|.::.|:|:
  Fly   550 EQDREAKLSKKV--RVQQKRGREK 571

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LARP4XP_047284158.1 LARP_4 134..208 CDD:153404 24/78 (31%)
RRM_LARP4 213..289 CDD:410106 15/88 (17%)
Larp7NP_524795.2 LA 57..135 CDD:128955 25/77 (32%)
RRM1_LARP7 148..220 CDD:409732 16/112 (14%)
RRM2_LARP7 471..548 CDD:409958 21/102 (21%)

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