DRSC/TRiP Functional Genomics Resources

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Protein Alignment DDX42 and SPAC1006.07

DIOPT Version :9

Sequence 1:NP_031398.2 Gene:DDX42 / 11325 HGNCID:18676 Length:938 Species:Homo sapiens
Sequence 2:NP_594854.1 Gene:SPAC1006.07 / 2542948 PomBaseID:SPAC1006.07 Length:392 Species:Schizosaccharomyces pombe


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DDX42NP_031398.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..114
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 182..203
Q motif 253..281
PRK10590 254..688 CDD:236722
DEADc 255..459 CDD:238167
DEAD box 407..410
HELICc 470..601 CDD:238034
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 737..938
Necessary for interaction with TP53BP2. /evidence=ECO:0000269|PubMed:19377511 738..833
SPAC1006.07NP_594854.1 PTZ00424 7..392 CDD:185609
DEADc 21..221 CDD:238167
HELICc 232..347 CDD:238034
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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