DRSC/TRiP Functional Genomics Resources

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Protein Alignment KIF12 and kif18b

DIOPT Version :9

Sequence 1:XP_005251740.1 Gene:KIF12 / 113220 HGNCID:21495 Length:669 Species:Homo sapiens
Sequence 2:XP_002939283.3 Gene:kif18b / 100490953 XenbaseID:XB-GENE-5960389 Length:872 Species:Xenopus tropicalis


Alignment Length:732 Identity:199/732 - (27%)
Similarity:302/732 - (41%) Gaps:159/732 - (21%)


- Green bases have known domain annotations that are detailed below.


Human    12 ARSLEQGPEGPETPIQVVLRVRPMSAAELRRGQQSVLHCSGTRTLQVSPP-------------GG 63
            |.|.|:|      .:.||:||||.:..|......:|:.......|...|.             ..
 Frog     5 ASSTEEG------NVSVVVRVRPPNQREQEGNHHAVVQVVDHNMLVFDPDEPETTGVFSSLRGND 63

Human    64 GP-----EVAFRFGAVLDAARTQEDVFRACGVRRLGELALRGFSCTVFTFGQTGSGKTYTLTGPP 123
            ||     ::.|.|..:......|:|||... .:.:.:..|.|::|:||.:|.||:|||:|:.|  
 Frog    64 GPKRKGKDMKFIFDRIFGENSRQQDVFEHT-TKEILDGVLNGYNCSVFAYGATGAGKTHTMLG-- 125

Human   124 PQGEGVPVPPSLAGIMQRTFAWLLDRVQHLGAPVTLRA--SYLEIYNEQVRDLLSLGSPR-PLPV 185
              .|..|      |:|..|...|..|::.:....:...  ||||:||||::|||   .|| .|.:
 Frog   126 --SEADP------GVMYLTMVELYRRIEAIKEEKSCEVLISYLEVYNEQIQDLL---EPRGSLAI 179

Human   186 RWNKTRGFYVEQLRVVEFGSLEALMELLQTGLSRRRNSAHTLNQASSRSHALLTLYISRQTAQQM 250
            |.:..:|..|:.|...:..|.:.|:::|.:|...|.......|.:||.|||:..:|:.    ||.
 Frog   180 REDPQKGVVVQGLSFHQPKSADQLLQMLASGNLNRTQHPTDANASSSHSHAVFQIYVK----QQD 240

Human   251 PSVDPGEPPVGGKLCFVDLAGSEKVAATGSRGELMLEANSINRSLLALGHCISLLLDPQRKQSHI 315
            .:|...:.....|:..:||||||:.:.|.::||.:.|..:||||||||.:.|:.|.|.:.|::||
 Frog   241 RTVSISQDVRVAKMSLIDLAGSERASTTNAKGERLREGANINRSLLALINVINALADAKSKKAHI 305

Human   316 PFRDSKLTKLLADSLGGRGVTLMVACVSPSAQCLPETLSTLRYASRAQRVTTRPQAPKSPV---- 376
            |:||||||:||.||:||...|:|:|.:||||....:|.:||:||:||:.:..   :.||.|    
 Frog   306 PYRDSKLTRLLKDSIGGNCRTVMIAAISPSALSYDDTYNTLKYANRAKEIKL---SMKSNVINLD 367

Human   377 ------AKQPQRLETEMLQLQEENRRLQFQLDQMDCKASGLSGARVAWAQRNLYGMLQEFMLENE 435
                  |...:.|:.|:.:|:|:.|..:.: :|.|...|                       :|.
 Frog   368 CHISKYAAVCEELKAEVAELREKLRFYEMK-EQPDDDTS-----------------------DNS 408

Human   436 RLRKEKSQLQNSRDLAQNEQRILAQQVHALERRLLSACYHHQQGPGLTPPCPCLMAPAPPCHALP 500
            ...|...:.:...||...||...|..:..      |:|......|....|......|........
 Frog   409 LQDKTSPRREEHSDLGSPEQGSGALLLST------SSCQSQDHKPAEMNPRKWDQVPLNCSLGRE 467

Human   501 PLYSCPCCH------------------ICPLCRV-PLAHWACLPGEHHLPQVLDPEASGGRPPSA 546
            .|...||.|                  :...|.: .||.......|..|.| |:..|..|:..:|
 Frog   468 ELEKNPCLHEALKDDAAERLVTSLLNFVRKQCEILKLAGLYTPELEDELRQ-LEGLALRGQKATA 531

Human   547 RPPPWAPPCSPGSAKCPRERSHSDWTQTRVLAEMLT--EEEVVPSAPPL--------------PV 595
                               ...::..|.....||.|  |:|.||..|.:              ||
 Frog   532 -------------------EKVTEKEQVTEEHEMETHKEQEEVPQTPLVEDVVFDIKEEVIEDPV 577

Human   596 RPP-KTSPGLR-GASACPDVGPGFQT--WPRDWR------PSETRLAAPCDVAAASHPAVRAHGA 650
            .|. |..||.| .|...||..|..::  .|...|      |::.|||     ...|.|.|:....
 Frog   578 PPARKRKPGKRYRADILPDNSPSLRSPIVPVKRRREATNTPTKARLA-----GVPSTPEVQVKRP 637

Human   651 QAKSSLPIEGQVGTQET 667
            : |||:|...:|..:.:
 Frog   638 R-KSSIPSRCRVSLRSS 653

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KIF12XP_005251740.1 KISc 25..363 CDD:276812 122/358 (34%)
Kinesin 31..365 CDD:278646 121/354 (34%)
Kinesin-relat_1 <383..469 CDD:289481 15/85 (18%)
kif18bXP_002939283.3 KISc_KIP3_like 23..355 CDD:276821 117/349 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
NCBI 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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