DRSC/TRiP Functional Genomics Resources

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Protein Alignment CHRM4 and Octbeta1R

DIOPT Version :10

Sequence 1:NP_000732.2 Gene:CHRM4 / 1132 HGNCID:1953 Length:479 Species:Homo sapiens
Sequence 2:NP_651057.1 Gene:Octbeta1R / 42652 FlyBaseID:FBgn0038980 Length:508 Species:Drosophila melanogaster


Alignment Length:463 Identity:111/463 - (23%)
Similarity:186/463 - (40%) Gaps:158/463 - (34%)


- Green bases have known domain annotations that are detailed below.


Human    22 SSHNRYETVEMVFI-ATVTGSLSLVTVVGNILVMLSIKVNRQLQTVNNYFLFSLACADLIIGAFS 85
            |||     :.:||: ..:.|.:.|..::||:||::|:..:|:|:.:.|||:.|||.||:::...:
  Fly   101 SSH-----LALVFVKCFIIGFIILAAILGNMLVIVSVMRHRKLRIITNYFVVSLAVADMLVALCA 160

Human    86 MNLYTVYIIKGYWPLGAVVCDLWLALDYVVSNASVMNLLIISFDRYFCVTKPLTYPARRTTKMAG 150
            |......:|.|.|..|:|:||:|.:.|...|.||:|:|..||.|||:.:.:||.||...|.:...
  Fly   161 MTFNASVMISGKWMFGSVMCDMWNSFDVYFSTASIMHLCCISVDRYYAIVQPLDYPLIMTQRRVF 225

Human   151 LMIAAAWVLSFVLWAPAIL-FWQFVVGKRTVPDNQCFI-------QFLSNPAVTFGTAIAAFYLP 207
            :|:...|:      :||:| |.....|..|..:|..::       :|..|.|....::..:|::|
  Fly   226 IMLLMVWL------SPALLSFLPICSGWYTTTENYKYLKSNPHICEFKVNKAYAIVSSSMSFWIP 284

Human   208 VVIMTVLYIHISLASRSRVHKHRPEGPKEK---KAKTLAFLKSPLMKQSVKKPPPGEAAREELRN 269
            .::|..:|..|          ::....:|:   ::|..|.|                        
  Fly   285 GIVMLSMYYRI----------YQEADRQERLVYRSKVAALL------------------------ 315

Human   270 GKLEEAPPPALPPPPRPVADKDTSNESSSGSATQNTKERPATELSTTEATTPAMPAPPLQPRALN 334
              ||:....:..|.|||                                                
  Fly   316 --LEKHLQISQIPKPRP------------------------------------------------ 330

Human   335 PASRWSKIQIVTKQTGNECVTAIEIVPATPAGMRPAANVARKFASIARNQVRKKRQMAARERKVT 399
                                 :|::..:|.:.||                         ||||..
  Fly   331 ---------------------SIQVEQSTISTMR-------------------------RERKAA 349

Human   400 RTIFAILLAFILTWTPYNVMVLVNTFCQSCI-PDTVWSIGYWLCYVNSTINPACYALCN----AT 459
            ||:..|:.||::.|.|:.:..:|::.|.||| |..:..|.:|:.|.||.:||..||..|    |.
  Fly   350 RTLGIIMSAFLICWLPFFLWYIVSSLCDSCITPRLLVGILFWIGYFNSALNPIIYAYFNRDFRAA 414

Human   460 FKKTFRHL 467
            ||||.:.|
  Fly   415 FKKTLKSL 422

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CHRM4NP_000732.2 7tmA_mAChR_M4 33..464 CDD:341344 106/447 (24%)
TM helix 1 34..60 CDD:341344 8/26 (31%)
TM helix 2 67..93 CDD:341344 9/25 (36%)
TM helix 3 105..135 CDD:341344 14/29 (48%)
TM helix 4 147..170 CDD:341344 5/23 (22%)
TM helix 5 192..221 CDD:341344 7/28 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 271..333 6/61 (10%)
TM helix 6 393..423 CDD:341344 11/29 (38%)
TM helix 7 432..457 CDD:341344 9/24 (38%)
Octbeta1RNP_651057.1 7tmA_DmOct-betaAR-like 109..415 CDD:320194 101/441 (23%)
TM helix 1 109..135 CDD:320194 7/25 (28%)
TM helix 2 142..168 CDD:320194 9/25 (36%)
TM helix 3 180..210 CDD:320194 14/29 (48%)
TM helix 4 222..245 CDD:320194 6/28 (21%)
TM helix 5 269..298 CDD:320194 7/38 (18%)
TM helix 6 343..373 CDD:320194 12/54 (22%)
TM helix 7 383..408 CDD:320194 9/24 (38%)

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