DRSC/TRiP Functional Genomics Resources

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Protein Alignment CHRM3 and TyrRII

DIOPT Version :10

Sequence 1:NP_000731.1 Gene:CHRM3 / 1131 HGNCID:1952 Length:590 Species:Homo sapiens
Sequence 2:NP_650651.1 Gene:TyrRII / 42135 FlyBaseID:FBgn0038541 Length:586 Species:Drosophila melanogaster


Alignment Length:631 Identity:151/631 - (23%)
Similarity:251/631 - (39%) Gaps:150/631 - (23%)


- Green bases have known domain annotations that are detailed below.


Human    26 DAGLPPGTVTHFGSYNVSRAAGNFSSPDGT-----TDDPLGGHTV-------------------- 65
            ||.||...:.   |..::.|:||.:|.|||     |....||..:                    
  Fly     8 DAMLPYSKLL---STALTVASGNSNSSDGTLLLIQTSAAPGGDVMATGAGAGKLGVPSMNSYLVS 69

Human    66 --W--QVVFIAFLTGILALVTIIGNILVIVSFKVNKQLKTVNNYFLLSLACADLIIGVISMNLFT 126
              |  .:....||  ::.|||::||.|||::....::|:||.|.|:::||..|.::|...|....
  Fly    70 MAWPKSLAVAVFL--VIILVTVVGNTLVILAVLTTRRLRTVTNCFVMNLAITDWLVGTCVMPPSV 132

Human   127 TYIIMNRWALGNLACDLWLAIDYVASNASVMNLLVISFDRYFSITRPLTYRAKRTTKR-AGVMIG 190
            ...|...|..|.:.||:|:::|.:..:.|:::|..||.|||.::|:||||..||.:|| |.:||.
  Fly   133 VLYITGTWRFGWILCDIWISLDILLCSGSILSLCAISLDRYLAVTQPLTYSKKRRSKRLALLMIL 197

Human   191 LAWVISFVLWAPAILFWQYFVGKRTVPPGEC-------FIQFLSEPTITFGTAIAAFYMPVTIMT 248
            :.|:.:..:..|..|.| |.||:......:|       ::.|         :|:.:|::|:|:|.
  Fly   198 VVWITALSITCPPYLGW-YEVGRHQAEFVDCRYNQNKGYVVF---------SAMGSFFIPLTVML 252

Human   249 ILYWRI-YKETEKRTKELAGLQASGT---EAETENFVHPTGSSRSCSSYELQQQSMKRSNRRKYG 309
            .:|.:| |..|.:|.:.:....:..|   :.:.:||:         |..|               
  Fly   253 YVYVKIGYVLTSRRQRIVRDAYSERTADYDVDGDNFI---------SESE--------------- 293

Human   310 RCHFWFTTKSWKPSSE---QMDQDHSSSDSWNNNDAAASLENS--------ASSDEEDIGSETRA 363
              |:..|...|.|:.:   :.:..|....|...|.||...::|        .||.....|:...|
  Fly   294 --HYHCTPTKWLPNRKSRWRFNSLHDPPPSAATNAAAKGHQSSVKCSKCSKCSSATGTAGAGAGA 356

Human   364 -IYSIVLKLPGHSTILNSTKLPSSDNLQVPEEELGMVDLERKADKLQAQK-SVDDGG----SFPK 422
             :....|......|...                  :|::.|.:..:.... |...||    |.|.
  Fly   357 GVVDKTLTFKHQPTFYE------------------LVEVSRLSSLIHCSAISCKYGGPCMHSTPS 403

Human   423 SFSKLPIQLESAVDTAKTSDV-NSSVGKSTATLPLSFKE--ATLAKRFALKTRSQITKR------ 478
            ....:..: .|..||....:| |::...:|.|:.|...|  ...||:...:.||.....      
  Fly   404 GMHYVGTE-ASFSDTCLGGNVSNNTTTTTTNTVALETNEKLEAEAKQKQQQQRSSFDHHHPHAHH 467

Human   479 -----------------KRMSLVK-EKKAAQTLSAILLAFIITWTPYNIMVLVNTFCDSCIPKTF 525
                             .|:|..| :.|.|:||:.::...|..|.|:.:..|:..|...  |...
  Fly   468 HGSHGQQSHHNHHHRMPMRVSTTKRDSKTAKTLTIVMGGLIACWLPFFVYYLLIPFLPR--PAVL 530

Human   526 WNLGY---WLCYINSTVNPVCYALCNKTFRTTFKMLLLCQCDKKKR 568
            .:|.:   |:.::|..:||..||..|..|||.|..|......|:||
  Fly   531 EDLMFGFTWIGWVNCAINPFIYAFYNPDFRTAFWRLTCRPICKQKR 576

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CHRM3NP_000731.1 7tmA_mAChR_M3 66..>270 CDD:320426 66/214 (31%)
TM helix 1 70..96 CDD:320426 10/25 (40%)
TM helix 2 103..130 CDD:320426 7/26 (27%)
TM helix 3 141..171 CDD:320426 11/29 (38%)
TM helix 4 183..206 CDD:320426 7/23 (30%)
TM helix 5 228..257 CDD:320426 8/29 (28%)
Basolateral sorting signal 275..281 1/5 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 323..357 8/44 (18%)
7tm_GPCRs <484..564 CDD:475119 24/83 (29%)
TM helix 6 490..512 CDD:320426 6/21 (29%)
TM helix 7 523..548 CDD:320426 7/27 (26%)
TyrRIINP_650651.1 7tm_GPCRs 78..>270 CDD:475119 65/203 (32%)
TM helix 1 78..101 CDD:410628 10/24 (42%)
TM helix 2 110..132 CDD:410628 7/21 (33%)
TM helix 3 148..170 CDD:410628 6/21 (29%)
TM helix 4 194..210 CDD:410628 3/15 (20%)
TM helix 5 233..256 CDD:410628 6/31 (19%)
7tm_GPCRs <491..563 CDD:475119 22/73 (30%)
TM helix 6 497..519 CDD:320098 6/21 (29%)
TM helix 7 531..556 CDD:320098 7/24 (29%)

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