Sequence 1: | NP_031404.1 | Gene: | Abca4 / 11304 | MGIID: | 109424 | Length: | 2310 | Species: | Mus musculus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_651628.1 | Gene: | snu / 43391 | FlyBaseID: | FBgn0039594 | Length: | 808 | Species: | Drosophila melanogaster |
Alignment Length: | 310 | Identity: | 84/310 - (27%) |
---|---|---|---|
Similarity: | 155/310 - (50%) | Gaps: | 25/310 - (8%) |
- Green bases have known domain annotations that are detailed below.
Mouse 929 VCVKNLVKVF--EPSGRPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLPPTSGTV-LIG 990
Mouse 991 GKDIETNLDVVRQSLGMCPQHNILFHHLTVAEHILFYAQLKGRSWEEAQLEMEAMLEDTGLHHKR 1055
Mouse 1056 NEEAQDLSGGMQRKLSVAIAFVGDSKVVVLDEPTSGVDPYSRRSIWDLLLKY-RSG-RTIIMSTH 1118
Mouse 1119 HMDEADLLGDRIAIISQGRLYCSGTPLFLKNCFGTGFYLTLVRKMKNIQSQRGGCEGVCSCTSKG 1183
Mouse 1184 FSTRCP-------TRVDEITEEQVLDGDVQELMDLVYHHVPEAKLVECIG 1226 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Abca4 | NP_031404.1 | rim_protein | 1..2271 | CDD:130324 | 84/310 (27%) |
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 891..910 | ||||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1311..1344 | ||||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 2266..2310 | ||||
snu | NP_651628.1 | LolD | 73..290 | CDD:224059 | 65/217 (30%) |
ABC_DR_subfamily_A | 74..286 | CDD:213197 | 64/213 (30%) | ||
pip_yhgE_Nterm | 427..>474 | CDD:276270 | |||
ABC2_membrane_3 | 429..801 | CDD:289468 | |||
ABC2_membrane | 601..769 | CDD:279410 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E2759_KOG0059 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.900 |