Sequence 1: | XP_006537617.1 | Gene: | Abca1 / 11303 | MGIID: | 99607 | Length: | 2263 | Species: | Mus musculus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001036360.1 | Gene: | Eato / 34783 | FlyBaseID: | FBgn0028539 | Length: | 1597 | Species: | Drosophila melanogaster |
Alignment Length: | 1882 | Identity: | 477/1882 - (25%) |
---|---|---|---|
Similarity: | 803/1882 - (42%) | Gaps: | 452/1882 - (24%) |
- Green bases have known domain annotations that are detailed below.
Mouse 456 LDWTAQDIM----AFLAKNP---EDVQSPNGSV-YTWREAFNETNQAIQTISRFMECVNLNKLEP 512
Mouse 513 IPTEVRLINKSMEL-LDERKFWAGIVFTGITPDSVELPHH-----VKYKI---RMDIDNVERTNK 568
Mouse 569 IKDGYWDPGPRADPFEDMRYVWGGFAYLQDVVEQAIIRVLTGSE--KKTGVYVQQMPYPCYVDDI 631
Mouse 632 FLRVMSRSMPLFMTLAWIYSVAVIIKSIVY----EKEARLKETMRI---MGLDNGILWFSWFVSS 689
Mouse 690 LIPLLVSAGLLVVILKLGNLLPYSDPSVVFVFLSVFAMVTILQ----CFLISTLFSRANLAAACG 750
Mouse 751 GIIYFTLYLPYVLCV--AWQD---YVGFSIKIFASLLSPVAFGFGCEYFALFEEQGIGVQWD--N 808
Mouse 809 LFESPVEEDGFNLTTAVSMMLFDTFLYGVMTWYIEAVFPGQYGIPRPWYFPCTKSYWFGEEIDEK 873
Mouse 874 SHPGSSQKGVSEICMEEEPTHLRLGVSIQNLVKVYRDGMK--VAVDGLALNFYEGQITSFLGHNG 936
Mouse 937 AGKTTTMSILTGLFPPTSGTAYILGKDIRSEMSSIRQNLGVCPQHNVLFDMLTVEEHIWFYARLK 1001
Mouse 1002 GLSEKHVKAEMEQMALDVGLPPSKLKSKTSQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPY 1066
Mouse 1067 SRRGIWELLLKYRQGRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTLV 1131
Mouse 1132 KKDVESSLSSCRNSSSTVSCLKKVVPGLPAAGQSGGRGGEVQRLVALTQDVSAISNLIRKHVSEA 1196
Mouse 1197 RLVEDIGHELTYVLPYEAAKEGAFVELFHEIDDRLSDLGISSYGISETTLEEIFLKVA-EESGVD 1260
Mouse 1261 AETSDGT---LPARRNRRAFGDKQSCLHPFTEDDAVDPNDSDIDPESRETDLLSGMDGKGSYQLK 1322
Mouse 1323 GWKLTQQQFVALLWKRLLIARRSRKGFFAQIVLPAVFVCIALVFSLIVPPFGKYPSLELQPWMYN 1387
Mouse 1388 EQYTFVSNDAPEDMGTQELLNALTKDPGFGTRCMEGNPIPDTPCLAGEEDWTISPVPQSIVDLFQ 1452
Mouse 1453 NGNWTMKNPSPACQCSSDKIKKMLPVCPPGAGGLPPPQRKQKTADILQNLTGRNISDYLVKTYVQ 1517
Mouse 1518 IIAKSLKNKIWVNEFRYGGFSLGV-SNSQALPPSHEVNDAIKQMKKLLKLTKDSSADRFLSSL-- 1579
Mouse 1580 -------GRFMAGLDTKNNVKVWFNNKGWHAISSFLNVINNAILRANLQKGENPSQYGITAFNHP 1637
Mouse 1638 LNLTKQQLSEVALMTTSVDVLVSICVIFAMSFVPASFVVFLIQERVSKAKHLQFISGVKPVIYWL 1702
Mouse 1703 SNFVWDMCNYVVPATLVIIIFIC---FQQKSYV------SSTNLPVLALLLLLYGWSITPLMYPA 1758
Mouse 1759 SFVFKIPST--AYVVLTSVNLFIGINGSVATFVLELFTNN-----KLNDINDILKSVFLIF-PHF 1815
Mouse 1816 CLGRGLIDMVKNQAMADALERFGENRFVSPLSWDLVGRNLF---AMAVEGVVFFLITVLIQYRF- 1876
Mouse 1877 ------------FIRPR-PVKAKLP--PLNDEDEDVRRERQRILD--GGGQND-ILEIKELTKIY 1923
Mouse 1924 RRKRKPAVDRICIGIPPGECFGLLGVNGAGKSTTFKMLTGDTPVTRGDAFLNKNSILSNIHEVHQ 1988
Mouse 1989 NMGYCPQFDAITELLTGREHVEFFALLRGVPEKEVG-------KVGEWAIRKLGLVKYGEKYASN 2046
Mouse 2047 YSGGNKRKLSTAMALIGGPPVVFLDEPTTGMDPKARRFLWNCALSIVKEGRSVVLTSHSMEECEA 2111
Mouse 2112 LCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIVVRIAGSNPDLKPVQEFFGL---AFPGSVLKEK 2173
Mouse 2174 HRNMLQYQLPSSLSSL--ARIFSILSQ---SKKRLHIEDYSVSQTTLDQVFVNF---AKDQS 2227 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Abca1 | XP_006537617.1 | rim_protein | 6..2238 | CDD:130324 | 477/1882 (25%) |
Eato | NP_001036360.1 | ABC2_membrane_3 | <209..347 | CDD:289468 | 37/147 (25%) |
CcmA | 460..767 | CDD:224054 | 110/355 (31%) | ||
ABC_subfamily_A | 461..679 | CDD:213230 | 82/221 (37%) | ||
ABC2_membrane_3 | <937..1117 | CDD:289468 | 44/213 (21%) | ||
ABC_subfamily_A | 1255..1479 | CDD:213230 | 99/226 (44%) | ||
drrA | 1262..1573 | CDD:130256 | 122/315 (39%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C167838496 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E2759_KOG0059 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | - | - | QHG53524 | |
OrthoDB | 1 | 1.010 | - | - | D131191at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000051 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100045 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
7 | 6.660 |