Sequence 1: | XP_011542333.1 | Gene: | LYST / 1130 | HGNCID: | 1968 | Length: | 3855 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_510030.2 | Gene: | lyst-1 / 181379 | WormBaseID: | WBGene00011361 | Length: | 2760 | Species: | Caenorhabditis elegans |
Alignment Length: | 3383 | Identity: | 636/3383 - (18%) |
---|---|---|---|
Similarity: | 1118/3383 - (33%) | Gaps: | 1156/3383 - (34%) |
- Green bases have known domain annotations that are detailed below.
Human 760 HVCSHHNQCLPQDVLQIYVKTL---PILLK--SRVIRDLFLSCNGVSQIIELNCLNGIRSHSLKA 819
Human 820 FETLIISLGEQQKDASVPDIDGIDIEQKELSSVHVGTSFHHQQAYSDSPQSLSKFYAGLKEAYPK 884
Human 885 RRKTVNQDVHINTINLFLCVAFLCVSKEAESDRESANDSEDTSGYDSTASEPLSHMLPCISLESL 949
Human 950 VLPSPEHMHQAADIWSMCRWIYMLSSVFQKQFYRLGGFRVCHKLIFMIIQKLFRSHKEEQGKKEG 1014
Human 1015 DTSVNENQDLNRISQPKRTMKEDLLSLAIKSDPIPSELGSLKKSADSLGKLELQHISSINVEEVS 1079
Human 1080 ATEAAPEEAKLFTSQESETSLQSIRLLEALLAICLHGARTSQQKMELELPNQNLSVESILFE-MR 1143
Human 1144 DHL---SQSKVIETQLAKPLFDALLRVALGNYSADFEHN--DAMTEKSHQSAEELSSQPGDFSEE 1203
Human 1204 AEDSQCCSFKLLVEEEGYEADSE-------SNPEDGETQDDGVD----LKSETEGFSASSSP--- 1254
Human 1255 -------------NDLLENLTQG-EII---YPEICM---LELNLLSASK-----AKLD---VLAH 1291
Human 1292 VFESFLKIIRQKEKNVFLLMQQGTVKNLLGGFLSILTQDDSDFQACQRV-----LVDLLVS---- 1347
Human 1348 ------------LMSSRTCSEELTLLLRIFLEK----SPCTKILLLGILKIIESDTTMSPSQ--- 1393
Human 1394 --YLTFPLLHAPNLSNGVSSQKYPGILNSKAMGLLR-------RARVSRSKKEADRESFPHRLLS 1449
Human 1450 SWHIAPVHLPLLGQNC----WPHLSEGFSVSLWFNVECIHEAESTTEKGKKIKKRNKSLILPDSS 1510
Human 1511 FDGTESDRPEGAEYINPGERLIEEGCIHIISLGSKALMIQVWADPHNATLIFRVCMDSNDDMKAV 1575
Human 1576 LLAQVESQENIFLPS----KW----QHLVLTYLQQPQGKRRIHGKISIWVSGQRKPDVTLDFMLP 1632
Human 1633 -RKTSLSSDSNKTFCMIGHCLSSQEEFLQLAGKWDLGNLLLF-----NGAKVGSQEAFYLYACGP 1691
Human 1692 NHTSVMP-CKYGKPVNDYS-----KYINKEILRCEQIRELFMTKKDVDIGLLIESLSVVYTTYCP 1750
Human 1751 AQYTIYEPVIRLKGQMKTQLSQRPF--SSK--------EVQSILLEPHHLKNLQPTEYKTIQGIL 1805
Human 1806 HEIGGTGIFVFLFARVVEL-----SSCEETQALALRVILSLI--------KYNQQRVHELENCNG 1857
Human 1858 LSMIHQVLIKQKCIVGFYILKTLLEGCCGEDIIYMNENGEFKLDVDSNAIIQDVKLLEELLLDWK 1922
Human 1923 IWSKAEQGVWETLLAALEVLIRADHHQQMFNIKQLLKAQVVHHFLLTCQVLQEYKEGQLTPMPRE 1987
Human 1988 VCRSFVKIIAEVLGSPPDLELLTIIFNFLLAVHPPTNTYVCHNPTNFYFSLHIDGKIFQEKVRSI 2052
Human 2053 MYLRHSSSGGRSLMSPGFMVISPSGFTASPYEGENSSNIIPQQMAAHMLRSRSLPAFPTSSLLTQ 2117
Human 2118 SQKLTGSLGCSIDRLQNIADTY-VATQSKKQNSLGSSDTLKKGKEDAFISSCESAKTVCEMEAVL 2181
Human 2182 SAQVSVSDVPKGVLGFPVVKADHKQLGAEPRSEDD------SPGDESCPR--------RPDYLKG 2232
Human 2233 LASFQRSHSTIASLGLAFPSQNGSAAVGRWPSLVDRNTDDWENFAYSLGYEPNYNRTASAHSVTE 2297
Human 2298 DCLVPICCGLYEL-----LSGVLLILPDVLL-----EDVMDKLIQADTLLVLVN--HPSPAIQQG 2350
Human 2351 VIKLLDAYFARASKEQKDKFLKNRGFSLLANQLYLHRGTQELLEC-----FIEMFFGRHIGLDEE 2410
Human 2411 FDLEDVRNMGLFQKWSVIPILGLIETSLYDNILLHNALLL----------LLQILNSCSKVADML 2465
Human 2466 LDNGLLYVLCNTVAALNGLEKNIPMSEYKLLACDIQQLFIAVTIHACSSSGSQYF-----RVIED 2525
Human 2526 LIVML----GYLQNSKNKRTQ-----NMAVALQLRVLQAAMEFIRTTANHDSENLTDSLQSPSAP 2581
Human 2582 HHAVVQKRKSIAGSIPMKGSIIPHLPRHHFGSYGQLPMPFSFGPLNQDSSPQFSPGCTTCVVPPG 2646
Human 2647 AGPRKFPLAQTESLLMKMRSVANDELHVMMQRRMSQENPSQATETELAQRLQRLTVLAVNRIIYQ 2711
Human 2712 EFNSDIIDILRTPENVTQSKTSVFQTEISEENIHHEQSSVFNPFQKEIFTYLVEGFKVSIGSSKA 2776
Human 2777 SGSKQQWTKILWSCKETFRMQ--LGRLLVHILSPAH----------AAQERKQIFEIVHEPNHQE 2829
Human 2830 ILRDCLSPSLQHGAKLVLYLSELIHNHQGELTEEELGTAELLMNAL-------------KLCGHK 2881
Human 2882 CIPPSASTKADLIKMIKEEQKKYETEEGVNKAAWQKTVNNNQQSLFQRLDSKSKDISKI------ 2940
Human 2941 ---AADITQAVSLSQGNERKKVIQHIRGMYKV----DLSASRHWQELIQQLTHDRAVWYDPIYYP 2998
Human 2999 TSWQLDPTEGPNRERRRLQRCYLTIPNKYLLRDRQKSEDVVKPPLSYLFEDKTHS-----SFSST 3058
Human 3059 VKDKA-----------ASESIRVNRRCISVAPSRETAGELLLGKCGMYFVEDNASDTVESSSLQG 3112
Human 3113 ELEPASFSWTYEEIKEVHK---RWWQLRDNAVEIFLTNGRTLLLAFDNTKVRDDVYHNILTNNLP 3174
Human 3175 NLL--EYGNITALTNLWYTGQITNFEYLTHLNKHAGRSFNDLMQYPVFPFILADYVSETLDLNDL 3237
Human 3238 LIYRNLSKPIAVQYKEKEDRYVDTYKYLEEEYRKGAREDDPMPPVQPYHYGSHYSNSGTVLHFLV 3302
Human 3303 RMPPFTKMFLAYQDQSFDIPDRTFHSTNTTWRLSSFESMTDVKELIPEFFYLPEFLVNREGFDFG 3367
Human 3368 VRQNGERVNHVNLPPWARNDPRL----FILIHRQALESDYVSQNICQWIDLVFGYKQKGKASVQA 3428
Human 3429 INVFHPATYFGMDVSAVEDPVQRRALETMIKTYGQTPRQLFHMAHVSRPGAKLNIEGELPAAVGL 3493
Human 3494 LVQFAFRETREQVKEITYPSPLSWIKGLKWGEY-VGSPSAPVPVVCFSQPHGERFGSLQA-LPTR 3556
Human 3557 AICGLSRNFCLLMTYSKEQGVRSMNSTDIQW-----SAILSWGYADNILRLKSKQSEPPVNFIQS 3616
Human 3617 SQQYQVTSCAWVPDSCQLFTGSKCGVITAYTNRFTSSTPSEIEMETQIH---------------- 3665
Human 3666 LYGHTEEITSLFVCKPYSILISVSRD---GTCIIWDLNR-----LCYVQSLAGHKSPVTAVSASE 3722
Human 3723 TSGDIATVCDSAGGGSDLRL---W------TVNGDLVG---HVHCREIICSVAFSNQP------- 3768
Human 3769 ---------------EGVSINVIAGGLENGIVRLWSTWDLK-------------PVREITFPKSN 3805
Human 3806 KPI 3808 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
LYST | XP_011542333.1 | PH_BEACH | 3066..3171 | CDD:275391 | 17/107 (16%) |
Beach | 3186..3476 | CDD:214982 | 123/293 (42%) | ||
WD40 | <3530..3837 | CDD:225201 | 56/356 (16%) | ||
WD40 repeat | 3582..3619 | CDD:293791 | 8/41 (20%) | ||
WD40 | 3583..3832 | CDD:295369 | 47/302 (16%) | ||
WD40 repeat | 3623..3668 | CDD:293791 | 7/60 (12%) | ||
WD40 repeat | 3673..3709 | CDD:293791 | 7/43 (16%) | ||
WD40 repeat | 3716..3749 | CDD:293791 | 5/41 (12%) | ||
WD40 repeat | 3759..3800 | CDD:293791 | 9/75 (12%) | ||
lyst-1 | NP_510030.2 | Beach | 2087..2373 | CDD:214982 | 123/293 (42%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG1786 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D101142at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.820 |