DRSC/TRiP Functional Genomics Resources

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Protein Alignment PHF21B and Mi-2

DIOPT Version :9

Sequence 1:NP_612424.1 Gene:PHF21B / 112885 HGNCID:25161 Length:531 Species:Homo sapiens
Sequence 2:NP_001014591.1 Gene:Mi-2 / 40170 FlyBaseID:FBgn0262519 Length:1983 Species:Drosophila melanogaster


Alignment Length:61 Identity:29/61 - (47%)
Similarity:33/61 - (54%) Gaps:2/61 - (3%)


- Green bases have known domain annotations that are detailed below.


Human   351 HDEHCAACKRGANLQPCGTCPGAYHLSCLEPPLKTAPKGVWVCPRCQQKAL--KKDEGVPW 409
            |.|.|..||.|..|..|.:||.|||..||.|||.|.|.|.|.||||....|  |.::.:.|
  Fly   437 HQEFCRVCKDGGELLCCDSCPSAYHTFCLNPPLDTIPDGDWRCPRCSCPPLTGKAEKIITW 497

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PHF21BNP_612424.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 79..99
Nuc_recep-AF1 108..193 CDD:288658
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 184..222
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 238..277
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 295..314
PHD_PHF21B 354..396 CDD:276999 22/41 (54%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 507..531
Mi-2NP_001014591.1 CHDNT 138..190 CDD:285335
PHD1_CHD_II 380..422 CDD:277006
PHD2_CHD_II 440..482 CDD:277007 22/41 (54%)
CHROMO 490..558 CDD:237991 2/8 (25%)
CHROMO 615..667 CDD:214605
SNF2_N 734..1028 CDD:278600
DEXDc 751..907 CDD:238005
Helicase_C 1053..1167 CDD:278689
DUF1087 <1292..1337 CDD:283996
DUF1086 1380..1517 CDD:283992
CHDCT2 1756..1927 CDD:285336
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0383
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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