DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment KLF12 and cbt

DIOPT Version :9

Sequence 1:XP_011533209.1 Gene:KLF12 / 11278 HGNCID:6346 Length:415 Species:Homo sapiens
Sequence 2:NP_722636.1 Gene:cbt / 33224 FlyBaseID:FBgn0043364 Length:428 Species:Drosophila melanogaster


Alignment Length:368 Identity:105/368 - (28%)
Similarity:157/368 - (42%) Gaps:87/368 - (23%)


- Green bases have known domain annotations that are detailed below.


Human    55 SPNVHNYPDMEAVPLLLNNVKGEPPEDSLSVDHFQTQTEPVDLSINKARTSPTAVSSSPVSMTAS 119
            :||..:..| ||..:.:.|.|....:.::|:      |.|.|..::..:.:........|:.:.:
  Fly    55 TPNPSDTED-EAPEIAVPNKKPRLEQPAMSM------TPPPDQKLDDDQKAERVSVIMRVNSSGA 112

Human   120 ASSPSSTSTSSSSSSRLASSPTVITSVSSASSSSTVLTPGPLVASASGVGGQQFLHIIHPVPPS- 183
            .||.|....||||:|..:||....||.||                               |||: 
  Fly   113 VSSSSQDENSSSSTSCCSSSSNTNTSTSS-------------------------------VPPTV 146

Human   184 ----SPMNLQSNKLSHVHRIPVVVQSVPVVYTAVRSPGNVNNTIVVPLLEDGRGHGKAQMDPRGL 244
                ...|:..|....::|    .::..|....|::|......:|.|                  
  Fly   147 EDDYPEANVWRNLKFKMNR----KRAAEVALPPVQTPETPVAKLVTP------------------ 189

Human   245 SPRQSKSDSDDDDLPNVTLDSVNETGSTA-----LSIARAVQEVHPSPVSRVRGNRMNNQKFPCS 304
             |..::...:::..|.:|...|:...|:|     ||...|.|.  |:||.:.  ..|:.:|....
  Fly   190 -PAPAECIKEEEIKPILTPIYVSPVASSASQLILLSTVAAQQS--PTPVPKT--PTMSEEKLTTR 249

Human   305 ISPFSIESTRRQRRSESPDSRKRRIHRCDFEGCNKVYTKSSHLKAHRRTHTGEKPYKCTWEGCTW 369
            |:.....:||            .||:.|.|..|.|.|.||||||||:|.||||:|:.|.||.|..
  Fly   250 ITAAQAAATR------------SRIYECSFPDCGKNYFKSSHLKAHQRVHTGERPFICKWENCDK 302

Human   370 KFARSDELTRHYRKHTGVKPFKCADCDRSFSRSDHLALHRRRH 412
            :|:|||||:||.|.|||.|.|:|:.|.:.|.|||||:.|.:||
  Fly   303 RFSRSDELSRHKRTHTGEKKFQCSVCQKKFMRSDHLSKHVKRH 345

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KLF12XP_011533209.1 COG5048 <241..414 CDD:227381 68/177 (38%)
zf-C2H2 330..354 CDD:278523 14/23 (61%)
C2H2 Zn finger 332..354 CDD:275368 14/21 (67%)
zf-H2C2_2 346..>363 CDD:290200 11/16 (69%)
C2H2 Zn finger 362..384 CDD:275368 13/21 (62%)
zf-H2C2_2 376..401 CDD:290200 13/24 (54%)
C2H2 Zn finger 392..412 CDD:275368 9/19 (47%)
cbtNP_722636.1 zf-C2H2 263..287 CDD:278523 14/23 (61%)
C2H2 Zn finger 265..287 CDD:275368 14/21 (67%)
COG5048 <270..362 CDD:227381 46/76 (61%)
zf-H2C2_2 279..306 CDD:290200 16/26 (62%)
C2H2 Zn finger 295..317 CDD:275368 13/21 (62%)
zf-H2C2_2 309..332 CDD:290200 12/22 (55%)
zf-C2H2 323..345 CDD:278523 10/21 (48%)
C2H2 Zn finger 325..345 CDD:275368 9/19 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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