DRSC/TRiP Functional Genomics Resources

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Protein Alignment TREX1 and Trex1

DIOPT Version :10

Sequence 1:NP_338599.1 Gene:TREX1 / 11277 HGNCID:12269 Length:314 Species:Homo sapiens
Sequence 2:NP_035767.4 Gene:Trex1 / 22040 MGIID:1328317 Length:314 Species:Mus musculus


Alignment Length:315 Identity:231/315 - (73%)
Similarity:250/315 - (79%) Gaps:2/315 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     1 MGSQALPPGPMQTLIFFDMEATGLPFSQPKVTELCLLAVHRCALESPPTSQGPPPTVPPPPRVVD 65
            ||||.||.|.||||||.|:||||||.|:|:|||||||||||.|||:...|||.||.||.||||||
Mouse     1 MGSQTLPHGHMQTLIFLDLEATGLPSSRPEVTELCLLAVHRRALENTSISQGHPPPVPRPPRVVD 65

Human    66 KLSLCVAPGKACSPAASEITGLSTAVLAAHGRQCFDDNLANLLLAFLRRQPQPWCLVAHNGDRYD 130
            |||||:||||||||.||||||||.|.|...|||.||||||.||.|||:|||||.|||||||||||
Mouse    66 KLSLCIAPGKACSPGASEITGLSKAELEVQGRQRFDDNLAILLRAFLQRQPQPCCLVAHNGDRYD 130

Human   131 FPLLQAELAMLGLTSALDGAFCVDSITALKALERASSPSEHGPRKSYSLGSIYTRLYGQSPPDSH 195
            |||||.|||.|...|.|||.||||||.||||||:|||||.:|.||||||||||||||.|:|.|||
Mouse   131 FPLLQTELARLSTPSPLDGTFCVDSIAALKALEQASSPSGNGSRKSYSLGSIYTRLYWQAPTDSH 195

Human   196 TAEGDVLALLSICQWRPQALLRWVDAHARPFGTIRPMYGVTA-SARTKPRPSAVTTTAHLATTRN 259
            |||||||.|||||||:|||||:|||.|||||.|::||||..| :..|..||.|.|.|..|||. |
Mouse   196 TAEGDVLTLLSICQWKPQALLQWVDEHARPFSTVKPMYGTPATTGTTNLRPHAATATTPLATA-N 259

Human   260 TSPSLGESRGTKDLPPVKDPGALSREGLLAPLGLLAILTLAVATLYGLSLATPGE 314
            .|||.|.||..|..||.|.|.|.|:|||||||.||.:||||:||||||.||:||:
Mouse   260 GSPSNGRSRRPKSPPPEKVPEAPSQEGLLAPLSLLTLLTLAIATLYGLFLASPGQ 314

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TREX1NP_338599.1 DnaQ_like_exo 14..211 CDD:447876 155/196 (79%)
Necessary for endoplasmic reticulum localization. /evidence=ECO:0000250|UniProtKB:Q91XB0 236..314 46/78 (59%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 240..278 19/37 (51%)
Interaction with UBQLN1. /evidence=ECO:0000269|PubMed:23979357 243..314 44/70 (63%)
Necessary for cytoplasmic retention. /evidence=ECO:0000250|UniProtKB:Q91XB0 281..314 24/32 (75%)
Trex1NP_035767.4 TREX1_2 14..211 CDD:99839 155/196 (79%)
Necessary for endoplasmic reticulum localization. /evidence=ECO:0000269|PubMed:18724932 236..314 46/78 (59%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 237..284 23/47 (49%)
Interaction with UBQLN1. /evidence=ECO:0000250|UniProtKB:Q9NSU2 244..314 44/70 (63%)
Necessary for cytoplasmic retention. /evidence=ECO:0000269|PubMed:18724932 281..314 24/32 (75%)

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