DRSC/TRiP Functional Genomics Resources

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Protein Alignment TREX1 and plex9.1

DIOPT Version :10

Sequence 1:NP_338599.1 Gene:TREX1 / 11277 HGNCID:12269 Length:314 Species:Homo sapiens
Sequence 2:XP_005174272.1 Gene:plex9.1 / 101886651 ZFINID:ZDB-GENE-131127-357 Length:244 Species:Danio rerio


Alignment Length:238 Identity:62/238 - (26%)
Similarity:94/238 - (39%) Gaps:79/238 - (33%)


- Green bases have known domain annotations that are detailed below.


Human    12 QTLIFFDMEATGLPFSQPKVTELCLLA---------VHRCALESPPTSQGPPPTVPPPPRVVDKL 67
            :||:|||:|.|||..|:..:.:|..::         :.||                         
Zfish    55 ETLVFFDLETTGLDTSRCDIVQLSAISGAQVFSVYLLPRC------------------------- 94

Human    68 SLCVAPGKACSPAASEITGL----STAVLAAHGRQCFDDNLANLLLAFLR-RQPQPW---CLVAH 124
              |:..|      ||::|||    ||.:|.....|......|  |..|:| .|.|.:   .||.|
Zfish    95 --CITEG------ASQVTGLWVDGSTLMLRERPVQTVPHQQA--LTGFIRFLQNQTFGRPILVGH 149

Human   125 NGDRYDFPLLQAELAMLGLTSALD--GAFCVDSITALK-----ALERASSP--SEHGPRKSYSLG 180
            |..|:|:|:|:..|...||.....  .:.|||:::..:     ||::.|.|  .:|..::.|.  
Zfish   150 NSRRFDWPILRRVLEEFGLLQEFRSCASECVDTLSLSREMFRNALQKFSQPFLVQHFLQQEYG-- 212

Human   181 SIYTRLYGQSPPDSHTAEGDVLALLSICQ-WRPQALLRWVDAH 222
                         :|.|..||..|..:.: |||...||  |.|
Zfish   213 -------------AHDASEDVRTLQELYRVWRPSLELR--DNH 240

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TREX1NP_338599.1 DnaQ_like_exo 14..211 CDD:447876 54/223 (24%)
Necessary for endoplasmic reticulum localization. /evidence=ECO:0000250|UniProtKB:Q91XB0 236..314
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 240..278
Interaction with UBQLN1. /evidence=ECO:0000269|PubMed:23979357 243..314
Necessary for cytoplasmic retention. /evidence=ECO:0000250|UniProtKB:Q91XB0 281..314
plex9.1XP_005174272.1 DEDDh 58..228 CDD:176648 53/219 (24%)
Blue background indicates that the domain is not in the aligned region.

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