Sequence 1: | XP_005255118.1 | Gene: | ATXN2L / 11273 | HGNCID: | 31326 | Length: | 1104 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_017444890.1 | Gene: | Atxn2l / 361649 | RGDID: | 1565868 | Length: | 1133 | Species: | Rattus norvegicus |
Alignment Length: | 1137 | Identity: | 1045/1137 - (91%) |
---|---|---|---|
Similarity: | 1058/1137 - (93%) | Gaps: | 37/1137 - (3%) |
- Green bases have known domain annotations that are detailed below.
Human 1 MLKPQPLQQPSQPQQPPPTQQAVARRPPGGTSPPNGGLPGPLATSAAPPGPPAAASPCLGPVAAA 65
Human 66 GSGLRRGAEGILAPQPPPPQQHQERPGAAAIGSARGQSTGKGPPQSPVFEGVYNNSRMLHFLTAV 130
Human 131 VGSTCDVKVKNGTTYEGIFKTLSSKFELAVDAVHRKASEPAGGPRREDIVDTMVFKPSDVMLVHF 195
Human 196 RNVDFNYATKDKFTDSAIAMNSKVNGEHKEKVLQRWEGGDSNSDDYDLESDMSNGWDPNEMFKFN 260
Human 261 EENYGVKTTYDSSLSSYTVPLEKDNSEEFRQRELRAAQLAREIESSPQYRLRIAMENDDGRTEEE 325
Human 326 KHSAVQRQGSGRESPSLASREGKYIPLPQRVREGPRGGVRCSSSRGGRPGLSSLPPRGPHHLDNS 390
Human 391 SPGPGSEARGINGGPSRMSPKAQRPLRGAKTLSSPSNRPSGETSVPPPPAAPPFLPVGRMYPPRS 455
Human 456 PKSAAPAPISASCPEPPIGSAVPTSSASIPVTSSVSDPGVGSISPASPKISLAPTDVKELSTKEP 520
Human 521 GRTLEPQELARIAGKVPGLQNEQKRFQLEELRKFGAQFKLQPSSSPENSLDPFPPRILKEEPKGK 585
Human 586 EKEVDGLLTSEPMGSPVSSKTESVSDKEDKPPLAPSGGTEGPEQPPPPCPSQTGSPPVGLIKGED 650
Human 651 KDEGPVAEQVKKSTLNPNAKEFNPTKPLLSVNKSTSTPTSPGPRTHSTPSIPVLTAGQSGLYSPQ 715
Human 716 YISYIPQIHMGPAVQAPQMYPYPVSNSVPGQQGKYRGAK-------------------------- 754
Human 755 -----GSLPPQRSDQHQPASAPPMMQ-AAAAAGPPLVAATPYSSYIPYNPQQFPGQPAMMQPMAH 813
Human 814 YPSQPVFAPMLQSNPRMLTSGSHPQAIVSSSTPQYPSAEQPTPQALYATVHQSYPHHATQLHAHQ 878
Human 879 PQPATTPTGSQPQSQHAAPSPVQQHQAGQAPHLGSGQPQQNLYHPGALTGTPPSLPPGPSAQSPQ 943
Human 944 SSFPQPAAVYAIH-HQQLPHGFTNMAHVTQAHVQTGITAAPPPHPGAPHPPQVMLLHPPQSHGGP 1007
Human 1008 PQGAVPQSGVPALSASTPSPYPYIGHPQGEQPGQAPGFPGGADDRILCRVGRSHSRRRQGLAPGS 1072
Human 1073 VLCFPPSSLSCDPAAPLPTASPALSDPDCLLT 1104 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
ATXN2L | XP_005255118.1 | SM-ATX | 122..191 | CDD:291131 | 68/68 (100%) |
PBP1 | 209..750 | CDD:227507 | 504/540 (93%) | ||
LsmAD | 264..326 | CDD:284215 | 61/61 (100%) | ||
TFIIA | 763..>948 | CDD:281188 | 182/185 (98%) | ||
TFIIA | 882..>1074 | CDD:281188 | 187/192 (97%) | ||
Atxn2l | XP_017444890.1 | SM-ATX | 121..194 | CDD:405176 | 71/72 (99%) |
PBP1 | 207..>412 | CDD:227507 | 203/204 (100%) | ||
LsmAD | 262..324 | CDD:399606 | 61/61 (100%) | ||
PHA03247 | <435..977 | CDD:223021 | 477/543 (88%) | ||
PHA03247 | <908..1128 | CDD:223021 | 215/220 (98%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C83693236 | |
Domainoid | 1 | 1.000 | 745 | 1.000 | Domainoid score | I3140 |
eggNOG | 1 | 0.900 | - | - | E1_COG5180 | |
HGNC | 1 | 1.500 | - | - | ||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H16513 | |
Inparanoid | 1 | 1.050 | 1978 | 1.000 | Inparanoid score | I1492 |
NCBI | 1 | 1.000 | - | - | ||
OMA | 1 | 1.010 | - | - | QHG49273 | |
OrthoDB | 1 | 1.010 | - | - | D116171at7742 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0001866 | |
OrthoInspector | 1 | 1.000 | - | - | oto129138 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_108744 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR12854 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X9068 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
18 | 18.270 |