DRSC/TRiP Functional Genomics Resources

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Protein Alignment SNX18 and MVP1

DIOPT Version :10

Sequence 1:XP_047272635.1 Gene:SNX18 / 112574 HGNCID:19245 Length:659 Species:Homo sapiens
Sequence 2:NP_013717.1 Gene:MVP1 / 855016 SGDID:S000004606 Length:511 Species:Saccharomyces cerevisiae


Alignment Length:570 Identity:122/570 - (21%)
Similarity:207/570 - (36%) Gaps:169/570 - (29%)


- Green bases have known domain annotations that are detailed below.


Human   148 QGSDDDWD---DEW--DDS---STVADEPGALG-SGAYPDLDGSSSAGVGAAGRYRLSTRSDLS- 202
            :|| |.|:   :.|  ||.   ||...||...| ||.:..|:.|:...........|.|...|. 
Yeast     5 EGS-DPWNTSSNAWTKDDDHVVSTTNSEPSLNGISGEFNTLNFSTPLDTNEEDTGFLPTNDVLEE 68

Human   203 ---------LGSRGGSVPPQHHPSGPKSSATVSRNLNRFSTFVKSGGEAFVLGEASGFVKDGDKL 258
                     ||:.|.|    ..|:...:...:.:|..|.....:|  ||.:|             
Yeast    69 SIWDDSRNPLGATGMS----QTPNIAANETVIDKNDARDQNIEES--EADLL------------- 114

Human   259 CVVLGPYGPEWQEN---PY-PFQCTI----DDPTKQTKFKGMKSYISYKLVPTHTQVP-----VH 310
                     :|..|   .| |....|    :.|.::.......:|:...|:...:..|     |.
Yeast   115 ---------DWTNNVRKTYRPLDADIIIIEEIPEREGLLFKHANYLVKHLIALPSTSPSEERTVV 170

Human   311 RRYKHFDWLYARLAEKFPVISVPHLPEKQ-ATGRFEEDFISKRRKGLIWWMNHMASHPVLAQCDV 374
            |||..|.||...|.:::|...:|.||.|: .:...::.|:.|||.||..::|.:..||.|:..|:
Yeast   171 RRYSDFLWLREILLKRYPFRMIPELPPKRIGSQNADQLFLKKRRIGLSRFINLVMKHPKLSNDDL 235

Human   375 FQHFLTCPSSTDEKAWKQGKRKAEKDEMVGANFFLTLSTPPAAALDLQEVESKIDGFKCFTKKMD 439
            ...|||.  .||..:|   :::|..|                                       
Yeast   236 VLTFLTV--RTDLTSW---RKQATYD--------------------------------------- 256

Human   440 DSALQLNHTANEFARKQVTG-----FKKEY-QKVGQSFRGLSQAFELDQQAFSVGL--------N 490
                    |:||||.|:::.     :|||: ::..|:...:..:.||   .:.:.|        .
Yeast   257 --------TSNEFADKKISQEFMKMWKKEFAEQWNQAASCIDTSMEL---WYRITLLLERHEKRI 310

Human   491 QAIAFTGDAYDAIGELFAE-----QPRQDLDPVMDL---LALYQGHLANFPDIIHVQ----KGKA 543
            ..:....:.::.:.:.|:|     .|.|..|.::|:   |::.:.||.....|...:    .|..
Yeast   311 MQMVHERNFFETLVDNFSEVTPKLYPVQQNDTILDINNNLSIIKKHLETTSSICKQETEEISGTL 375

Human   544 WPLEQVIWSVLCRLKGATLTAVPLWVSESYSTGALTKVKESRRHVEEGKMEVQKADGIQDRCNTI 608
            .|..::...:|..|:.         :.|.|...|...|.|.:||||..|.:::...|..|     
Yeast   376 SPKFKIFTDILLSLRS---------LFERYKIMAANNVVELQRHVELNKEKLESMKGKPD----- 426

Human   609 SFATLAEIHHFHQIRVRDFKSQMQH-----FLQQQII----FFQKVTQKL 649
              .:.||.....:|..:|.:|.::.     .::|.|:    .||: ||.|
Yeast   427 --VSGAEYDRIKKIIQKDRRSIIEQSNRAWLIRQCILEEFTIFQE-TQFL 473

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SNX18XP_047272635.1 SH3_SNX18 4..58 CDD:212830
PHA01929 <81..>138 CDD:177328
PX_SNX18 276..403 CDD:132819 37/136 (27%)
BAR_SNX18 415..656 CDD:153354 51/270 (19%)
MVP1NP_013717.1 COG5391 1..511 CDD:227680 122/570 (21%)
Blue background indicates that the domain is not in the aligned region.

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