DRSC/TRiP Functional Genomics Resources

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Protein Alignment SNX18 and Snx1

DIOPT Version :10

Sequence 1:XP_047272635.1 Gene:SNX18 / 112574 HGNCID:19245 Length:659 Species:Homo sapiens
Sequence 2:NP_608777.1 Gene:Snx1 / 33560 FlyBaseID:FBgn0031534 Length:458 Species:Drosophila melanogaster


Alignment Length:516 Identity:120/516 - (23%)
Similarity:180/516 - (34%) Gaps:158/516 - (30%)


- Green bases have known domain annotations that are detailed below.


Human   200 DLSLGSRGGSVPPQHHPSGPKSSATVSRNLNRFSTFV-----KSGGEAFVLGEASGFVKDGDKLC 259
            |::.|:..||...:.....| .|.|:.|  |....||     .|.|:...|.|.  ...|||   
  Fly    16 DINNGAATGSEDEEEEVPAP-GSVTLDR--NESDLFVSALSPSSIGDIHPLQEV--LTDDGD--- 72

Human   260 VVLGPYGPEWQENPYPFQCTIDDPTKQTKFKGMKSYISYKLVPTHTQVP--------VHRRYKHF 316
                          |.....:.||.|..  .||.||::|| |.|.|.:|        ..||:..|
  Fly    73 --------------YFISIVVSDPQKIG--DGMGSYLAYK-VTTKTNIPKFKRSEFSTLRRFSDF 120

Human   317 DWLYARLAEKFPVIS--VPHLPEKQATGR---------------FEEDFISKRRKGLIWWMNHMA 364
            ..::..|..|:..:.  :|..|.|...|.               ..::::..||..|..:::..|
  Fly   121 LGIHDLLVGKYMRLGRIIPPAPSKNIIGSTKVKISPQQSEPGTPMTQEWVEIRRAALERFVHRTA 185

Human   365 SHPVLAQCDVFQHFLTCPSSTDEKAWKQGKRKAEKDEMVGANFFLTLSTPPAAALDLQEVESKID 429
            .||||.....|.:||    .:|::.    .|......:.||......:       .:.|..:|| 
  Fly   186 QHPVLRVDLDFMNFL----ESDQEL----PRSVNTSALSGAGVIRLFN-------KVGETVNKI- 234

Human   430 GFKCFTKKMD----------------DSALQLNHTANE---FARKQ---VTGFKKEYQKVGQSFR 472
                 |.|||                |:.||..|.|.:   .:|::   :||.      |.:|..
  Fly   235 -----TYKMDENDPWFDDKITEVESLDANLQKLHNAMKSLVTSRRELSLLTGL------VAKSAA 288

Human   473 GLSQAFELDQQAFSVGLNQAIAFTGDAYDAIGELFAEQPRQDLDPVMDLLALYQGHLANFPDIIH 537
            .||...|      ..||::|::...|..:.|..|.:||...|...:.:.:..|.|.......|.|
  Fly   289 MLSTCEE------HTGLSRALSNLADVEEKIELLRSEQANSDFFILAEFIKDYLGLFGAIKCIFH 347

Human   538 VQKGKAWPLEQVIWSVLCRLKGATLTAVPLWVSESYSTGALTKVKESRRHVE---------EGKM 593
                     |:|             .|...|   .|:...|:|.:|:|...|         :.:.
  Fly   348 ---------ERV-------------KAFQNW---QYAQMQLSKRRENRGRFELANRADKLDQAQQ 387

Human   594 EVQKADGIQDRC----NTISFATLAEIHHFHQIRVRDFK--------SQMQHFLQQQIIFF 642
            ||.:..|...||    :.||.....|:..|...||:|||        .||.|  ||||:.:
  Fly   388 EVDEWQGKVQRCQQQFDDISAEIKREMERFELTRVKDFKVNIIKYIEDQMAH--QQQIVSY 446

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SNX18XP_047272635.1 SH3_SNX18 4..58 CDD:212830
PHA01929 <81..>138 CDD:177328
PX_SNX18 276..403 CDD:132819 35/151 (23%)
BAR_SNX18 415..656 CDD:153354 64/271 (24%)
Snx1NP_608777.1 PX_SNX1_2_like 75..203 CDD:132769 33/134 (25%)
BAR_SNX1_2 232..455 CDD:153307 63/260 (24%)
Blue background indicates that the domain is not in the aligned region.

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