DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SNX18 and Snx18

DIOPT Version :10

Sequence 1:XP_047272635.1 Gene:SNX18 / 112574 HGNCID:19245 Length:659 Species:Homo sapiens
Sequence 2:NP_570614.2 Gene:Snx18 / 170625 MGIID:2137642 Length:615 Species:Mus musculus


Alignment Length:659 Identity:596/659 - (90%)
Similarity:601/659 - (91%) Gaps:44/659 - (6%)


- Green bases have known domain annotations that are detailed below.


Human     1 MALRARALYDFRSENPGEISLREHEVLSLCSEQDIEGWLEGVNSRGDRGLFPASYVQVIRAPEPG 65
            |||||||||||:|||||||||||||||||||||||||||||:|||||||||||||||||||||||
Mouse     1 MALRARALYDFKSENPGEISLREHEVLSLCSEQDIEGWLEGINSRGDRGLFPASYVQVIRAPEPG 65

Human    66 PAGDGGPGAPARYANVPPGGFEPLPVAPPASFKPPPDAFQALLQPQQAPPPSTFQPPGAGFPYGG 130
            |..||||||||||||||||||||||.||||:|.|       |||||.:  |.:||||||||||||
Mouse    66 PPADGGPGAPARYANVPPGGFEPLPAAPPAAFPP-------LLQPQAS--PGSFQPPGAGFPYGG 121

Human   131 GALQPSPQQLYGGYQASQGSDDDWDDEWDDSSTVADEPGALGSGAYPDLDGSSSAGVGAAGRYRL 195
            |||||||||||||||||.||||||||||||||||||||||||||||||||||||||.||||||||
Mouse   122 GALQPSPQQLYGGYQASLGSDDDWDDEWDDSSTVADEPGALGSGAYPDLDGSSSAGGGAAGRYRL 186

Human   196 STRSDLSLGSRGGSVPPQHHPSGPKSSATVSRNLNRFSTFVKSGGEAFVLGEASGFVKDGDKLCV 260
            ||||||||||||.|.||.|..||.|||||||||||||||||||||||||||||||||||||||||
Mouse   187 STRSDLSLGSRGVSAPPAHQASGAKSSATVSRNLNRFSTFVKSGGEAFVLGEASGFVKDGDKLCV 251

Human   261 VLGPYGPEWQENPYPFQCTIDDPTKQTKFKGMKSYISYKLVPTHTQVPVHRRYKHFDWLYARLAE 325
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Mouse   252 VLGPYGPEWQENPYPFQCTIDDPTKQTKFKGMKSYISYKLVPTHTQVPVHRRYKHFDWLYARLAE 316

Human   326 KFPVISVPHLPEKQATGRFEEDFISKRRKGLIWWMNHMASHPVLAQCDVFQHFLTCPSSTDEKAW 390
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Mouse   317 KFPVISVPHLPEKQATGRFEEDFISKRRKGLIWWMNHMASHPVLAQCDVFQHFLTCPSSTDEKAW 381

Human   391 KQGKRKAEKDEMVGANFFLTLSTPPAAALDLQEVESKIDGFKCFTKKMDDSALQLNHTANEFARK 455
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Mouse   382 KQGKRKAEKDEMVGANFFLTLSTPPAAALDLQEVESKIDGFKCFTKKMDDSALQLNHTANEFARK 446

Human   456 QVTGFKKEYQKVGQSFRGLSQAFELDQQAFSVGLNQAIAFTGDAYDAIGELFAEQPRQDLDPVMD 520
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Mouse   447 QVTGFKKEYQKVGQSFRGLSQAFELDQQAFSVGLNQAIAFTGDAYDAIGELFAEQPRQDLDPVMD 511

Human   521 LLALYQGHLANFPDIIHVQKGKAWPLEQVIWSVLCRLKGATLTAVPLWVSESYSTGALTKVKESR 585
            ||||||||||||||||||||                                   ||||||||||
Mouse   512 LLALYQGHLANFPDIIHVQK-----------------------------------GALTKVKESR 541

Human   586 RHVEEGKMEVQKADGIQDRCNTISFATLAEIHHFHQIRVRDFKSQMQHFLQQQIIFFQKVTQKLE 650
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Mouse   542 RHVEEGKMEVQKADGIQDRCNTISFATLAEIHHFHQIRVRDFKSQMQHFLQQQIIFFQKVTQKLE 606

Human   651 EALHKYDSV 659
            |||||||||
Mouse   607 EALHKYDSV 615

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SNX18XP_047272635.1 SH3_SNX18 4..58 CDD:212830 51/53 (96%)
PHA01929 <81..>138 CDD:177328 40/56 (71%)
PX_SNX18 276..403 CDD:132819 126/126 (100%)
BAR_SNX18 415..656 CDD:153354 205/240 (85%)
Snx18NP_570614.2 SH3_SNX18 4..58 CDD:212830 51/53 (96%)
PX_SNX18 267..394 CDD:132819 126/126 (100%)
BAR_SNX18 406..612 CDD:153354 205/240 (85%)

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