DRSC/TRiP Functional Genomics Resources

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Protein Alignment HRH3 and hrh3

DIOPT Version :9

Sequence 1:XP_005260323.1 Gene:HRH3 / 11255 HGNCID:5184 Length:453 Species:Homo sapiens
Sequence 2:NP_001020689.1 Gene:hrh3 / 561773 ZFINID:ZDB-GENE-040724-204 Length:473 Species:Danio rerio


Alignment Length:443 Identity:240/443 - (54%)
Similarity:291/443 - (65%) Gaps:66/443 - (14%)


- Green bases have known domain annotations that are detailed below.


Human    29 FSAAWTAVLAALMALLIVATVLGNALVMLAFVADSSLRTQNNFFLLNLAISDFLVGAFCIPLYVP 93
            ||.:.:..|..||.||:.|||||||||:||||.:.|||||.|||.|||||:|||||.||||:|:|
Zfish    59 FSPSTSIFLTVLMTLLVFATVLGNALVILAFVVEKSLRTQGNFFFLNLAIADFLVGGFCIPVYIP 123

Human    94 YVLTGRWTFGRGLCKLWLVVDYLLCTSSAFNIVLISYDRFLSVTRAVSYRAQQGDTRRAVRKMLL 158
            |||||.|..|||||||||||||:|||:|.|||||||:|||.|||:|||||.|:|.|:.||.|||.
Zfish   124 YVLTGEWRLGRGLCKLWLVVDYMLCTASVFNIVLISFDRFQSVTKAVSYRCQKGITKDAVLKMLC 188

Human   159 VWVLAFLLYGPAILSWEYLSGGSSIPEGHCYAEFFYNWYFLITASTLEFFTPFLSVTFFNLSIYL 223
            ||:.|||||||||:|||:::|||.:|:|.|||||::|||||:||||:||||||:|||:||||||:
Zfish   189 VWLAAFLLYGPAIISWEHITGGSVVPDGECYAEFYFNWYFLMTASTVEFFTPFISVTYFNLSIYI 253

Human   224 NIQRRTRLRLDGAREAAGPEPPPEAQPS---------PPPPPGCWGCWQKGHGEAM------PLH 273
            ||:.|..:|              |.||:         .|          .|.|:..      |:.
Zfish   254 NIRNRCAMR--------------EEQPTYVRLRSFKMKP----------LGAGDVQRVFFVRPVE 294

Human   274 RYGVGEAAVGAEAGEATLGGGGGGGSVASPTSSSGSSSRGTERPRSLKRGSKP--------SASS 330
            ...|.:.|..:.....        .|.|..:::...:.|.::|..|......|        :||.
Zfish   295 ESRVADLASRSRCCRL--------ASTAKVSAAEFGNGRQSKRRDSTLADLPPLQVEERILAASE 351

Human   331 ASL----------EKRMKMVSQSFTQRFRLSRDRKVAKSLAVIVSIFGLCWAPYTLLMIIRAACH 385
            |..          ..|..||: |...|||||||:||||||||||.:|||||||||||||||||||
Zfish   352 AQFHYVDHSAGPHRHRPDMVA-SLANRFRLSRDKKVAKSLAVIVCVFGLCWAPYTLLMIIRAACH 415

Human   386 GHCVPDYWYETSFWLLWANSAVNPVLYPLCHHSFRRAFTKLLCPQKLKIQPHS 438
            |.||..|.||.||||||.||::||:||||||.||:|||:|||||.|.||||.:
Zfish   416 GQCVQHYLYEISFWLLWINSSINPILYPLCHSSFKRAFSKLLCPSKTKIQPQN 468

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HRH3XP_005260323.1 7tm_1 51..412 CDD:278431 208/393 (53%)
hrh3NP_001020689.1 7tm_1 81..442 CDD:278431 208/393 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 419 1.000 Domainoid score I4177
eggNOG 1 0.900 - - E33208_3BA0J
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 479 1.000 Inparanoid score I6791
NCBI 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG43860
OrthoDB 1 1.010 - - D210951at7742
OrthoFinder 1 1.000 - - FOG0008030
OrthoInspector 1 1.000 - - otm28350
orthoMCL 1 0.900 - - OOG6_108667
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R8330
SonicParanoid 1 1.000 - - X6932
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 1 1.500 - -
1414.270

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