DRSC/TRiP Functional Genomics Resources

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Protein Alignment GPR45 and gpr45

DIOPT Version :9

Sequence 1:NP_009158.3 Gene:GPR45 / 11250 HGNCID:4503 Length:372 Species:Homo sapiens
Sequence 2:XP_005167494.1 Gene:gpr45 / 795372 ZFINID:ZDB-GENE-070912-629 Length:375 Species:Danio rerio


Alignment Length:374 Identity:235/374 - (62%)
Similarity:292/374 - (78%) Gaps:4/374 - (1%)


- Green bases have known domain annotations that are detailed below.


Human     2 ACNSTSLEAYTYLLLNTSNASDSGSTQLPAPLRISLAIVMLLMTVVGFLGNTVVCIIVYQRPAMR 66
            |||.:||||...|....:...::.:..:|..||::||.:|:.|..:|||||.:||:||||:||||
Zfish     3 ACNGSSLEACGLLEPTETEMQEADTALMPTTLRVALAAIMIFMITIGFLGNGIVCLIVYQKPAMR 67

Human    67 SAINLLLATLAFSDIMLSLCCMPFTAVTLITVRWHFGDHFCRLSATLYWFFVLEGVAILLIISVD 131
            |||||||||||||||||||.|||||||||.|..|.||..|||:|..|||.||||||:||||||||
Zfish    68 SAINLLLATLAFSDIMLSLLCMPFTAVTLATTDWSFGMGFCRVSVMLYWLFVLEGVSILLIISVD 132

Human   132 RFLIIVQRQDKLNPRRAKVIIAVSWVLSFCIAGPSLTGWTLVEVPARAPQCVLGYTELPADRAYV 196
            ||||||||||||.|.|||::|..||.||.|::.|||.||....:.|:.|||:|||:|..|||.|.
Zfish   133 RFLIIVQRQDKLTPHRAKILIGASWALSLCVSLPSLVGWRTAGIGAQVPQCILGYSESLADRGYT 197

Human   197 VTLVVAVFFAPFGVMLCAYMCILNTVRKNAVRVHNQSD--SLDLRQLTRAGLRRLQRQQQVSVDL 259
            |.|.|||||.||||||.:|:|||||||:||:|:||.:.  |:.:..:::.||..||| .||::|:
Zfish   198 VLLAVAVFFVPFGVMLYSYLCILNTVRRNALRIHNHTSEGSVAISHVSKLGLTGLQR-PQVNIDM 261

Human   260 SFKTKAFTTILILFVGFSLCWLPHSVYSLLSVFSQRFYCGSSFYATSTCVLWLSYLKSVFNPIVY 324
            ||||:|||||||||:|||:|||||:|.|||||||:|||...:||..|...|||||||:||||::|
Zfish   262 SFKTRAFTTILILFIGFSVCWLPHTVVSLLSVFSRRFYLSPAFYPVSIGALWLSYLKAVFNPVIY 326

Human   325 CWRIKKFREACIELLPQTFQILPKVPERIRRRIQPSTVYVC-NENQSAV 372
            ||||:||||||:|.:|:||.:.||:|.|.||||:||.:||| :|.||:|
Zfish   327 CWRIRKFREACLEFMPKTFHLCPKIPGRSRRRIRPSNIYVCSSETQSSV 375

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GPR45NP_009158.3 7tmA_GPR45 35..335 CDD:320525 201/301 (67%)
TM helix 1 36..62 CDD:320525 14/25 (56%)
TM helix 2 69..92 CDD:320525 21/22 (95%)
TM helix 3 107..137 CDD:320525 24/29 (83%)
TM helix 4 146..168 CDD:320525 11/21 (52%)
TM helix 5 192..221 CDD:320525 20/28 (71%)
TM helix 6 260..290 CDD:320525 24/29 (83%)
TM helix 7 303..328 CDD:320525 16/24 (67%)
gpr45XP_005167494.1 7tm_4 43..>161 CDD:304433 89/117 (76%)
7tm_1 52..326 CDD:278431 185/274 (68%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C194334022
Domainoid 1 1.000 382 1.000 Domainoid score I5069
eggNOG 1 0.900 - - E33208_3BEH2
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H5228
Inparanoid 1 1.050 485 1.000 Inparanoid score I6691
NCBI 1 1.000 - -
OMA 1 1.010 - - QHG51083
OrthoDB 1 1.010 - - D244591at7742
OrthoFinder 1 1.000 - - FOG0011960
OrthoInspector 1 1.000 - - oto43848
orthoMCL 1 0.900 - - OOG6_117130
Panther 1 1.100 - - LDO PTHR24245
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R6796
SonicParanoid 1 1.000 - - X7403
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 1 1.500 - -
1717.340

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