DRSC/TRiP Functional Genomics Resources

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Protein Alignment PDCD10 and Ccm3

DIOPT Version :10

Sequence 1:NP_009148.2 Gene:PDCD10 / 11235 HGNCID:8761 Length:212 Species:Homo sapiens
Sequence 2:NP_650459.1 Gene:Ccm3 / 41876 FlyBaseID:FBgn0038331 Length:208 Species:Drosophila melanogaster


Alignment Length:213 Identity:102/213 - (47%)
Similarity:143/213 - (67%) Gaps:13/213 - (6%)


- Green bases have known domain annotations that are detailed below.


Human     3 MTMEEMKNEAETTSMVSMPLYAVMYPVFNELERVNLSAAQTLRAAFIKAEKENPGLTQDIIMKIL 67
            |||      .|.||.:.:|:  ::.|:|::|||.::.|||:||:|.:|:|:.|||...|::..|:
  Fly     1 MTM------GEPTSSLVLPV--ILRPIFSQLERRDVGAAQSLRSAILKSEQNNPGFCYDLVATIV 57

Human    68 EKKSVEVNFTESLLRMAAD----DVEEYMIERPEPEFQDLNEKARALKQILSKIPDEINDRVRFL 128
            .:..:.||..|::||:...    |:.||.:.|.|..||:||.|:.|||.|||:||||||||..||
  Fly    58 RRADLNVNLNEAVLRLQGKITEADLNEYRLTRTEEPFQELNRKSVALKVILSRIPDEINDRKTFL 122

Human   129 QTIKDIASAIKELLDTVNNVFKKYQ-YQNRRALEHQKKEFVKYSKSFSDTLKTYFKDGKAINVFV 192
            :|||:||||||:|||.||.:..... ...::|:|.:|||||||||.||.|||.|||:|:...||:
  Fly   123 ETIKEIASAIKKLLDVVNEIGSFIPGVTGKQAVEQRKKEFVKYSKKFSTTLKEYFKEGQPNAVFI 187

Human   193 SANRLIHQTNLILQTFKT 210
            ||..||.|||.|:.|.|:
  Fly   188 SALFLIRQTNQIMLTVKS 205

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PDCD10NP_009148.2 DUF1241 14..161 CDD:462018 67/151 (44%)
Ccm3NP_650459.1 DUF1241 4..156 CDD:462018 68/153 (44%)

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