DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment POLG2 and GRS2

DIOPT Version :10

Sequence 1:NP_009146.2 Gene:POLG2 / 11232 HGNCID:9180 Length:485 Species:Homo sapiens
Sequence 2:NP_015406.1 Gene:GRS2 / 856196 SGDID:S000006285 Length:618 Species:Saccharomyces cerevisiae


Alignment Length:596 Identity:98/596 - (16%)
Similarity:180/596 - (30%) Gaps:263/596 - (44%)


- Green bases have known domain annotations that are detailed below.


Human   100 GPLGVELRKNLAAEWWTSVVVFREQVFPVDALHHKPGPLL-PGD--------------------- 142
            ||.|.:|:.|| ...|....:..|.:..||      ||:| |.|                     
Yeast    39 GPPGCQLQNNL-IRLWREHFIMEENMLQVD------GPMLTPYDVLKTSGHVDKFTDWMCRNPKT 96

Human   143 ----SAFRLVSAETLREILQDKELSKEQLVAFLENVLKT-------------------------- 177
                .|..|:. :||::.|.||:::.:.: ..:|.:|.|                          
Yeast    97 GEYYRADHLIE-QTLKKRLLDKDVNPQDM-KNMEKILTTIDGFSGPELNLVMQEYNINDPVTNDV 159

Human   178 -----------------SGK----LRENLLHGALEHYVNCLDLVNKRLPYGLAQIGVCF------ 215
                             ||:    ||.....|...::...|::...::|:..|.||..|      
Yeast   160 LDALTSFNLMFETKIGASGQLKAFLRPETAQGQFLNFNKLLEINQGKIPFASASIGKSFRNEISP 224

Human   216 -------------------------HPVF----------------DTKQIRNGVK-SIGEKTEAS 238
                                     |..|                ::.:::..|| :|||...:.
Yeast   225 RSGLLRVREFLMAEIEHFVDPLNKSHAKFNEVLNEEIPLLSRRLQESGEVQLPVKMTIGEAVNSG 289

Human   239 LVWFTPPRTSNQWLDFWLRHRLQWWRKFAMSPSNFS------------SSDCQDEE--------- 282
            :|       .|:.|.:::....|:.....::...|.            ::||.|.|         
Yeast   290 MV-------ENETLGYFMARVHQFLLNIGINKDKFRFRQHLKNEMAHYATDCWDGEILTSYGWIE 347

Human   283 -------------------GR-------------------KGNKLYY--NFPWGKELIET-LWNL 306
                               ||                   :.||.::  .|....:|||: |...
Yeast   348 CVGCADRAAFDLTVHSKKTGRSLTVKQKLDTPKERTEWVVEVNKKFFGSKFKQKAKLIESVLSKF 412

Human   307 GDHELLHMYP-------------GNVSKL--------------HGRDGRKNVVPCVLSVNGDLDR 344
            ...||:..:.             |.:.||              |.|:    .:|.|:..:..|.|
Yeast   413 SQDELIRRHEELEKNGEFTCQVNGQIVKLDSSLVTIKMKTTLQHIRE----YIPNVIEPSFGLGR 473

Human   345 GMLAYLYDSFQLTENSFTRKKNLHRKVLKLHPCLAPIKV---ALDVGRGPTLELRQVCQGLFNEL 406
            .:.......||:..:|.:      |........:|||||   .:....|....|:::.|.|....
Yeast   474 IIYCIFDHCFQVRVDSES------RGFFSFPLQIAPIKVFVTTISNNDGFPAILKRISQALRKRE 532

Human   407 LENGISVWPGY--LETMQSSLEQLYSKYDEMSILFTVLVTETTLENGLIHLRSRD---------- 459
            :         |  ::...:|:.:.|::.||:...|.:.:...|:::..:.||.|:          
Yeast   533 I---------YFKIDDSNTSIGKKYARNDELGTPFGITIDFETIKDQTVTLRERNSMRQVRGTIT 588

Human   460 ---TTMKEMMH 467
               :|:.:|:|
Yeast   589 DVISTIDKMLH 599

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
POLG2NP_009146.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 28..65
class_II_aaRS-like_core 69..350 CDD:444800 72/459 (16%)
Pol_gamma_b_Cterm 354..481 CDD:239106 26/132 (20%)
GRS2NP_015406.1 glyS_dimeric 7..598 CDD:273051 96/593 (16%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.