DRSC/TRiP Functional Genomics Resources

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Protein Alignment POLG2 and polg2

DIOPT Version :10

Sequence 1:NP_009146.2 Gene:POLG2 / 11232 HGNCID:9180 Length:485 Species:Homo sapiens
Sequence 2:XP_031750242.1 Gene:polg2 / 100493143 XenbaseID:XB-GENE-1009985 Length:459 Species:Xenopus tropicalis


Alignment Length:428 Identity:223/428 - (52%)
Similarity:290/428 - (67%) Gaps:10/428 - (2%)


- Green bases have known domain annotations that are detailed below.


Human    59 APGSGEGSEALLEICQRRHFLSGSKQQLSRDSLLSGCHPGFGPLGVELRKNLAAEWWTSVVVFRE 123
            |.|:....::||.:||.|||:||...  |..|||.|.| ..||||||||:||.::||.|||:.||
 Frog    41 AAGTAHKQDSLLRLCQERHFISGGAP--SHTSLLQGGH-SLGPLGVELRRNLLSQWWNSVVLHRE 102

Human   124 QVFPVDALHHKPGPLLPGDSAFRLVSAETLREILQDKELSKEQLVAFLENVLKTSGKLRENLLHG 188
            ||..:|.....|.|.:..::....:..:.|      ..|..:|....|...:...|.||..||:|
 Frog   103 QVLAIDTALQLPNPSIAPEAPLLAICTQHL------LGLPPQQRGTCLGGPVGKCGVLRHELLYG 161

Human   189 ALEHYVNCLDLVNKRLPYGLAQIGVCFHPVFDTKQIRNGVKSIGEKTEASLVWFTPPRTSNQWLD 253
            ||..||..::|:||:||:|||:||.||||:.:..........|||:|.||||||..|::|.||.|
 Frog   162 ALMEYVPSMELLNKKLPFGLAEIGKCFHPIPEVANEGTIPPRIGERTVASLVWFISPKSSGQWQD 226

Human   254 FWLRHRLQWWRKFAMSPSNFSSSDCQDE-EGRKGNKLYYNFPWGKELIETLWNLGDHELLHMYPG 317
            :|||||||||:|||.|||.|...:.:.| :|.|.:.:.|.||||:|.||||.::.|..||.|:.|
 Frog   227 YWLRHRLQWWQKFAQSPSGFGCREIEQEGQGGKISVIQYEFPWGRETIETLCSMDDSALLQMHSG 291

Human   318 NVSKLHGRDGRKNVVPCVLSVNGDLDRGMLAYLYDSFQLTENSFTRKKNLHRKVLKLHPCLAPIK 382
            :.:||..|||||.|||.||.|:||||||:||||.|:.|.||....|.:...|:||||||.|||||
 Frog   292 SSTKLQARDGRKWVVPHVLWVSGDLDRGLLAYLSDALQQTEGPPVRGRYQQREVLKLHPTLAPIK 356

Human   383 VALDVGRGPTLELRQVCQGLFNELLENGISVWPGYLETMQSSLEQLYSKYDEMSILFTVLVTETT 447
            ||:|:|:|||.|||.|||||..||.|:|:.|||||.|::|.||||||:|||:|.:||||||:|.|
 Frog   357 VAVDMGKGPTGELRLVCQGLSTELREHGVYVWPGYQESLQGSLEQLYTKYDQMGVLFTVLVSEAT 421

Human   448 LENGLIHLRSRDTTMKEMMHISKLKDFLIKYISSAKNV 485
            |||||:..|||||.:||.:|:|||||||:.||::|.::
 Frog   422 LENGLLQARSRDTALKETVHVSKLKDFLLTYIAAATHL 459

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
POLG2NP_009146.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 28..65 2/5 (40%)
class_II_aaRS-like_core 69..350 CDD:444800 135/281 (48%)
Pol_gamma_b_Cterm 354..481 CDD:239106 82/126 (65%)
polg2XP_031750242.1 class_II_aaRS-like_core 54..324 CDD:444800 133/278 (48%)
Pol_gamma_b_Cterm 328..455 CDD:239106 82/126 (65%)

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