DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment FZD10 and Corin

DIOPT Version :9

Sequence 1:NP_009128.1 Gene:FZD10 / 11211 HGNCID:4039 Length:581 Species:Homo sapiens
Sequence 2:NP_610297.2 Gene:Corin / 35691 FlyBaseID:FBgn0033192 Length:1397 Species:Drosophila melanogaster


Alignment Length:234 Identity:55/234 - (23%)
Similarity:88/234 - (37%) Gaps:64/234 - (27%)


- Green bases have known domain annotations that are detailed below.


Human    27 ERPGDGKCQPIEIPMCK--DIGYNMTRMPNLMGHENQREAAIQLHEFAPLVEYGCHGHLRFFLCS 89
            :.|..|.|.||.:..|:  .|.||.|..||.:||..|.|....|..:..||:..|:..:..|||:
  Fly   772 KNPAPGTCLPIIVRFCQGPQIPYNYTVFPNYIGHFGQLETQTDLDSYEALVDVRCYELVSLFLCT 836

Human    90 LYAPMCTEQVSTPIPACRVMCEQARLKCSPIMEQFNFKWPDSLDC---RKLPNKNDPNYLCMEAP 151
            |:.|.|.:..:| :|.|:.:|.:...:|....:.|....|:.|:|   :..|:..|    |:   
  Fly   837 LFVPKCGQSGAT-VPPCKTLCTETMRRCGFFFDVFGLSLPEYLNCKLFKDFPSSED----CV--- 893

Human   152 NNGSDEPTRGSGLFPPLFRPQRPHSAQEHPLKDGG--------PGRGGCDNPGKFHHVE------ 202
              |.||             .:....|..||..||.        |....||.     |::      
  Fly   894 --GLDE-------------VREVMRAATHPKCDGFQCDQNRCLPQEYVCDG-----HLDCMDQAD 938

Human   203 --KSASCAP---------------LCTPGVDVYWSREDK 224
              |...|.|               :|...:|..:.::::
  Fly   939 EAKCERCGPDEIYCGDSQCIGTKHICDGIIDCPYGQDER 977

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FZD10NP_009128.1 CRD_FZ10 30..156 CDD:143571 38/130 (29%)
7tmF_FZD10 217..535 CDD:320165 0/8 (0%)
TM helix 1 226..251 CDD:320165
TM helix 2 260..281 CDD:320165
TM helix 3 310..336 CDD:320165
TM helix 4 353..369 CDD:320165
TM helix 5 391..420 CDD:320165
TM helix 6 440..467 CDD:320165
TM helix 7 497..522 CDD:320165
Lys-Thr-X-X-X-Trp motif, mediates interaction with the PDZ domain of Dvl family members. /evidence=ECO:0000250 526..531
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 560..581
PDZ-binding 579..581
CorinNP_610297.2 CRD_FZ 778..894 CDD:143549 36/125 (29%)
LDLa 911..942 CDD:238060 6/35 (17%)
LDLa 945..979 CDD:238060 4/33 (12%)
SR 980..>1034 CDD:214555
SRCR 992..1086 CDD:278931
Tryp_SPc 1103..1343 CDD:214473
Tryp_SPc 1104..1346 CDD:238113
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3577
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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