DRSC/TRiP Functional Genomics Resources

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Protein Alignment CHM and rep-1

DIOPT Version :10

Sequence 1:NP_000381.1 Gene:CHM / 1121 HGNCID:1940 Length:653 Species:Homo sapiens
Sequence 2:NP_001022928.1 Gene:rep-1 / 175311 WormBaseID:WBGene00022051 Length:510 Species:Caenorhabditis elegans


Alignment Length:39 Identity:12/39 - (30%)
Similarity:18/39 - (46%) Gaps:17/39 - (43%)


- Green bases have known domain annotations that are detailed below.


Human    49 CKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSN 87
            |:|:   ||.:||:|              ||.|.:|.|:
 Worm   308 CRVV---AGRVGCDL--------------IDDDDVDKSD 329

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CHMNP_000381.1 NAD_binding_8 13..>54 CDD:433218 2/4 (50%)
Rossmann-fold NAD(P)(+)-binding proteins 225..542 CDD:473865
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 606..653
rep-1NP_001022928.1 Rossmann-fold NAD(P)(+)-binding proteins 1..>361 CDD:473865 12/39 (31%)
Blue background indicates that the domain is not in the aligned region.

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