DRSC/TRiP Functional Genomics Resources

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Protein Alignment SOX21 and D

DIOPT Version :10

Sequence 1:NP_009015.1 Gene:SOX21 / 11166 HGNCID:11197 Length:276 Species:Homo sapiens
Sequence 2:NP_524066.1 Gene:D / 39570 FlyBaseID:FBgn0000411 Length:382 Species:Drosophila melanogaster


Alignment Length:274 Identity:118/274 - (43%)
Similarity:143/274 - (52%) Gaps:64/274 - (23%)


- Green bases have known domain annotations that are detailed below.


Human     7 HVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLGAEWKLLTESEKRPFIDEAKRLRAMHMKE 71
            |:||||||||||||.|||::|::||||||||||||||||||||.||||||||||||||||:||||
  Fly   141 HIKRPMNAFMVWSRLQRRQIAKDNPKMHNSEISKRLGAEWKLLAESEKRPFIDEAKRLRALHMKE 205

Human    72 HPDYKYRPRRKPKTLLKKDKFAFPVPYG-----LGGVADAEHPALKAGAGLHAGAGGGLVPESLL 131
            |||||||||||||..|...      |.|     .||:...     |.|||..|||||        
  Fly   206 HPDYKYRPRRKPKNPLTAG------PQGGLQMQAGGMGQQ-----KLGAGPGAGAGG-------- 251

Human   132 ANPEKAAAAAAAAAARV-----------FFP-------QSAAAAAAAAAAAAAGSPYSLLDLGSK 178
            .||........|.:..:           |.|       ||.||||||              :.::
  Fly   252 YNPFHQLPPYFAPSHHLDQGYPVPYFGGFDPLALSKLHQSQAAAAAA--------------VNNQ 302

Human   179 MAEISSSSSGLPYASSLGYPTAGAGAFHGAAAA---AAAAAAAAGGH-THSHPSPG-NPGYMIPC 238
            ..:...:...||..|...:   .:|.:.|.:|.   ||.:|.|||.: :.|..||| :||.:.|.
  Fly   303 GQQQGQAPPQLPPTSLSSF---YSGIYSGISAPSLYAAHSANAAGLYPSSSTSSPGSSPGTITPN 364

Human   239 NCSAWPSPGLQPPL 252
            .........|:.|:
  Fly   365 GMDGSMDSALRRPV 378

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SOX21NP_009015.1 HMG-box_SoxB 6..85 CDD:438790 69/77 (90%)
SOXp 77..>95 CDD:463537 9/17 (53%)
DNP_524066.1 HMG-box_SoxB 140..219 CDD:438790 69/77 (90%)

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