DRSC/TRiP Functional Genomics Resources

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Protein Alignment CHI3L1 and Idgf6

DIOPT Version :9

Sequence 1:NP_001267.2 Gene:CHI3L1 / 1116 HGNCID:1932 Length:383 Species:Homo sapiens
Sequence 2:NP_001286499.1 Gene:Idgf6 / 36868 FlyBaseID:FBgn0013763 Length:452 Species:Drosophila melanogaster


Alignment Length:437 Identity:121/437 - (27%)
Similarity:190/437 - (43%) Gaps:103/437 - (23%)


- Green bases have known domain annotations that are detailed below.


Human    24 LVCYYTSWSQYREGDGSCFPDALDRFL--CTHIIYSFANISNDHIDTWEWNDVT-------LYGM 79
            |||||.|.|..:||.|....|.|:..|  |.:::|.:|.|..|.......|...       ||..
  Fly    31 LVCYYDSASFVKEGLGKLVIDELEPALQFCDYLVYGYAGIERDSHKAVSLNQQLDLDLGKGLYRT 95

Human    80 LNTLKNRNPNLKTLLSVGG---------WNFGSQRFSKIASNTQSRRTFIKSVPPFLRTHGFDGL 135
            :..||.:.||:|.||||||         ......::.::..:...|..|:.:|...::|:|||||
  Fly    96 VTRLKRKYPNVKILLSVGGDKDIELDKDAKELPNKYLELLESPTGRTRFVNTVYSLVKTYGFDGL 160

Human   136 DLAWLYP-------------------------------GRRDKQHFTTLIKEMKAEFIKEAQPGK 169
            |:||.:|                               ....|:.||.|::::|..|..:     
  Fly   161 DVAWQFPKNKPKKVHSGIGSLWKGFKKVFSGDSIVDEKSEEHKEQFTALLRDVKNAFRPD----- 220

Human   170 KQLLLSAALSAGKVTIDSS--YDIAKISQHLDFISIMTYDFHGAWRG--TTGHHSPLFRGQEDAS 230
             .||||..:..   .::||  |||..:..:|||:::.|:||....|.  ...:.:|::...| .:
  Fly   221 -NLLLSTTVLP---NVNSSLFYDIPAVVNYLDFVNLGTFDFFTPQRNPEVADYAAPIYELSE-RN 280

Human   231 PDRFSNTDYAVGYMLRLGAPASKLVMGIPTFGRSFTLA--SSETGV--------GAPISGPGIPG 285
            |:  .|....|.|.||...||||:.:|:.|:||.:.|.  |.:|||        .||:.|.    
  Fly   281 PE--FNVAAQVKYWLRNNCPASKINVGVATYGRPWKLTDDSGDTGVPPVKDVKDEAPVGGN---- 339

Human   286 RFTKEAGTLAYYEIC--------DFLRGATVHRILGQQV-----PYA-----TKGNQ--WVGYDD 330
              |:..|..::.|:|        .:|:||....|..|..     .||     .||:.  ||.::|
  Fly   340 --TQVPGIYSWPEVCALLPNQNNAYLKGANAPLIKVQDPAKRFGSYAYRAADKKGDNGIWVSFED 402

Human   331 QESVKSKVQYLKDRQLAGAMVWALDLDDFQGSFCGQDLRFPLTNAIK 377
            .::...|..|::...|.|..::.|..|||:| .|..: ::|:..|||
  Fly   403 PDTAADKAGYVRTENLGGVALFDLSYDDFRG-LCTNE-KYPILRAIK 447

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
CHI3L1NP_001267.2 Glyco_18 23..357 CDD:214753 112/415 (27%)
GH18_chitolectin_chitotriosidase 24..380 CDD:119351 121/437 (28%)