Sequence 1: | NP_001165081.1 | Gene: | LDB3 / 11155 | HGNCID: | 15710 | Length: | 732 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001014693.1 | Gene: | ey / 43812 | FlyBaseID: | FBgn0005558 | Length: | 898 | Species: | Drosophila melanogaster |
Alignment Length: | 704 | Identity: | 144/704 - (20%) |
---|---|---|---|
Similarity: | 217/704 - (30%) | Gaps: | 214/704 - (30%) |
- Green bases have known domain annotations that are detailed below.
Human 24 NMP--LTISRITPGSKAAQSQLSQGDLVVAIDGVNTDTMTHLEAQNKIKSASYNLSLTLQKSKRP 86
Human 87 IPISTTAPPVQTPL----------------PVIPHQKDPALDTNGSLVAPSPSPEARASP----- 130
Human 131 ----GTPGT-PEL------------RPTFSPAFSRPSAF-SSLAEASDPGPPR-ASLRAKTS-PE 175
Human 176 GARDLLGPKALPG-SSQPRQYNNPIGLYSAETLREMAQMYQMSLRGKASGVGLPGGA-------D 232
Human 233 YQERF--------NPSALKDSALS--------THKP--IEVKGLGGKATIIHA------------ 267
Human 268 ---------QYNTPISMYSQDAIMDAIAGQAQAQGSDFSGSL-PIKDLAVDSASPVYQAVIKSQN 322
Human 323 KPEDEADEWARRSSNLQSRSFRILAQMTGTEFMQDP------------DEEALRRSRPQASSYSP 375
Human 376 A-VAASSAPATHTSYSEGPA-----APAPKPRVVTTASIRPSVYQPVPASTYSPSPGANYSPTPY 434
Human 435 TP----------SPAPAYTPSP-APAYTPSPVP---TYTPSPA-PAYTPSPAPNYNPAPSVAYSG 484
Human 485 GPAEPAS-----------------------------RPPWVT----DDSFSQKFAPGKSTT---S 513
Human 514 ISKQTLP-------------RGGPAYTPAGPQVPPLARGTVQRAERFPASSRTP 554 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
LDB3 | NP_001165081.1 | PDZ_signaling | 5..81 | CDD:238492 | 13/58 (22%) |
DUF4045 | <77..180 | CDD:330572 | 32/143 (22%) | ||
ZM | 189..214 | CDD:128974 | 5/24 (21%) | ||
DUF4749 | 263..353 | CDD:318205 | 19/111 (17%) | ||
Atrophin-1 | <387..554 | CDD:331285 | 48/235 (20%) | ||
LIM1_ZASP_Cypher | 556..607 | CDD:188838 | |||
LIM2_Enigma_like | 615..666 | CDD:188748 | |||
LIM3_Enigma_like | 674..727 | CDD:188749 | |||
ey | NP_001014693.1 | PAX | 98..221 | CDD:128645 | 4/11 (36%) |
Homeobox | 475..527 | CDD:278475 | 7/51 (14%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R6207 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.030 |