| Sequence 1: | NP_001165081.1 | Gene: | LDB3 / 11155 | HGNCID: | 15710 | Length: | 732 | Species: | Homo sapiens |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_731242.1 | Gene: | stck / 40999 | FlyBaseID: | FBgn0020249 | Length: | 348 | Species: | Drosophila melanogaster |
| Alignment Length: | 246 | Identity: | 66/246 - (26%) |
|---|---|---|---|
| Similarity: | 88/246 - (35%) | Gaps: | 76/246 - (30%) |
- Green bases have known domain annotations that are detailed below.
|
Human 554 PLCGHCNNVIRGPFLVAMGRSWHPEEFTCAYCKTSLADVCFVEEQ-------------------- 598
Human 599 -----------------------------------------------------NNVYCERCYEQF 610
Human 611 FAPLCAKCNTKIMGEVMHALRQTWHTTCFVCAACKKPFGNSLFHMEDGEPYCEKDYINLFSTKCH 675
Human 676 GCDFPVEAGDKFIEALGHTWHDTCFICAVCHVNL-EGQPFYSKKDRPLCKK 725 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| LDB3 | NP_001165081.1 | PDZ_PDLIM-like | 4..82 | CDD:467235 | |
| ZM | 189..214 | CDD:128974 | |||
| DUF4749 | 263..365 | CDD:464948 | |||
| PHA03247 | <387..554 | CDD:223021 | 66/246 (27%) | ||
| LIM1_ZASP_Cypher | 556..607 | CDD:188838 | 21/123 (17%) | ||
| LIM2_Enigma_like | 615..666 | CDD:188748 | 20/50 (40%) | ||
| LIM3_Enigma_like | 674..727 | CDD:188749 | 19/53 (36%) | ||
| stck | NP_731242.1 | LIM1_PINCH | 21..79 | CDD:188717 | |
| LIM2_PINCH | 82..133 | CDD:188718 | 17/50 (34%) | ||
| LIM3_PINCH | 146..206 | CDD:188719 | 4/59 (7%) | ||
| LIM4_PINCH | 212..265 | CDD:188720 | 21/52 (40%) | ||
| LIM5_PINCH | 273..326 | CDD:188721 | 19/53 (36%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||