DRSC/TRiP Functional Genomics Resources

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Protein Alignment POPDC1 and bves

DIOPT Version :10

Sequence 1:NP_009004.2 Gene:POPDC1 / 11149 HGNCID:1152 Length:360 Species:Homo sapiens
Sequence 2:NP_608426.1 Gene:bves / 33083 FlyBaseID:FBgn0031150 Length:414 Species:Drosophila melanogaster


Alignment Length:277 Identity:84/277 - (30%)
Similarity:140/277 - (50%) Gaps:46/277 - (16%)


- Green bases have known domain annotations that are detailed below.


Human    41 HHLVFHVANICFAVGLVIPTTLHLH----MIFLRGMLTLGCTLYIVWATLYRCALDIMIWNSVFL 101
            |||.|.:......:..:.|     |    .:::|.||.:||.:..:...|...|.|:::|:.:.|
  Fly    99 HHLYFQLGWAFLFLAFLAP-----HGPYGALWMRAMLLIGCLMMGMHGYLVAFAPDVILWSGMGL 158

Human   102 GVNILHLSYLLYKKRPVKIEKELSGMYRRLFEPLRVPPDLFRRLTGQFCMIQTLKKGQTYAAEDK 166
            .||.::|..:|.:.|||:.|:|:..:|..||:||.|....|:::.....:|:.||..:.||.|..
  Fly   159 FVNFIYLVVVLCRLRPVRFEQEIEAVYLALFQPLHVTRHQFKKVLNCMKVIRALKYQEVYAQEKV 223

Human   167 TSVDDRLSILLKGKMKVSYRGHFLHNIYPCAFIDSPEFRSTQMHKGEKFQVTIIADDNCRFLCWS 231
            |.||. ||::|.||:.||.....||.::|..|:||||:..  :...:.|||:|:|.:..|.|.|.
  Fly   224 TKVDS-LSLVLSGKLVVSQHQRALHIVFPHQFLDSPEWFG--VSTDDYFQVSIMAMEESRVLIWH 285

Human   232 RERLTYFLESEPFLYEIFRYLIGKDITNKLYSLNDPTLNDKKAKKLEHQLSLCTQISMLEMRNSI 296
            |::|...:.:||||..:|.:::|:|:..||..:                    ||:|     .||
  Fly   286 RDKLKLSIMAEPFLQTVFDHILGRDVVKKLMQV--------------------TQVS-----ESI 325

Human   297 AS---------SSDSDD 304
            ||         :.|::|
  Fly   326 ASNGFLPSGGYAEDAED 342

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
POPDC1NP_009004.2 Popeye 41..266 CDD:461448 75/228 (33%)
Required for interaction with CAV3. /evidence=ECO:0000250|UniProtKB:Q9ES83 93..115 6/21 (29%)
Required for interaction with KCNK2. /evidence=ECO:0000269|PubMed:26642364 136..186 18/49 (37%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 317..360
bvesNP_608426.1 Popeye 98..320 CDD:461448 75/248 (30%)
Blue background indicates that the domain is not in the aligned region.

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