DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment KIF3A and Khc

DIOPT Version :9

Sequence 1:NP_001287720.1 Gene:KIF3A / 11127 HGNCID:6319 Length:726 Species:Homo sapiens
Sequence 2:NP_476590.1 Gene:Khc / 36810 FlyBaseID:FBgn0001308 Length:975 Species:Drosophila melanogaster


Alignment Length:755 Identity:244/755 - (32%)
Similarity:380/755 - (50%) Gaps:117/755 - (15%)


- Green bases have known domain annotations that are detailed below.


Human    13 DNVKVVVRCRPLNEREKSMCYKQAV----SVDEMRGTITVHKTDSSNEPPKTFTFDTVFGPESKQ 73
            |::|||.|.||||:.|:....|..|    :|:|  ..|::        ..|.:.||.||.|.:.|
  Fly    11 DSIKVVCRFRPLNDSEEKAGSKFVVKFPNNVEE--NCISI--------AGKVYLFDKVFKPNASQ 65

Human    74 LDVYNLTARPIIDSVLEGYNGTIFAYGQTGTGKTFTMEGVRAIPELRGIIPNSFAHIFGHIAKAE 138
            ..|||..|:.|:..||.||||||||||||.:|||.|||||......:||||.....||.||...|
  Fly    66 EKVYNEAAKSIVTDVLAGYNGTIFAYGQTSSGKTHTMEGVIGDSVKQGIIPRIVNDIFNHIYAME 130

Human   139 GDTRFLVRVSYLEIYNEEVRDLLGKDQTQRLEVKERPDVGVYIKDLSAYVVNNADDMDRIMTLGH 203
            .:..|.::|||.|||.:::||||...:. .|.|.|..:...|:|..:...|::.:|:..::..|.
  Fly   131 VNLEFHIKVSYYEIYMDKIRDLLDVSKV-NLSVHEDKNRVPYVKGATERFVSSPEDVFEVIEEGK 194

Human   204 KNRSVGATNMNEHSSRSHAIFTITIECSEKGIDGNMHVRMGKLHLVDLAGSERQAKTGATGQRLK 268
            .||.:..|||||||||||::|.|.::  ::.:: |.....|||:||||||||:.:||||.|..|.
  Fly   195 SNRHIAVTNMNEHSSRSHSVFLINVK--QENLE-NQKKLSGKLYLVDLAGSEKVSKTGAEGTVLD 256

Human   269 EATKINLSLSTLGNVISALVDGKSTHVPYRNSKLTRLLQDSLGGNSKTMMCANIGPADYNYDETI 333
            ||..||.|||.||||||||.||..||:|||:|||||:||:|||||::|.:.....||.:|..||.
  Fly   257 EAKNINKSLSALGNVISALADGNKTHIPYRDSKLTRILQESLGGNARTTIVICCSPASFNESETK 321

Human   334 STLRYANRAKNIKNKARINED-PKDALLRQFQKEIEE---LKKKLEEGE-EI----SGSDISGSE 389
            |||.:..|||.:||...:||: ..:...|:::||.|:   ||.|:|:.| |:    :|..:...|
  Fly   322 STLDFGRRAKTVKNVVCVNEELTAEEWKRRYEKEKEKNARLKGKVEKLEIELARWRAGETVKAEE 386

Human   390 EDDDE----------EGEVGE----DGEKRKKRRGSSSSSSS---------DSTCSVIEKPLDKF 431
            :.:.|          |.|..:    :.....:|...::.|:|         .:.|..:.:.||  
  Fly   387 QINMEDLMEASTPNLEVEAAQTAAAEAALAAQRTALANMSASVAVNEQARLATECERLYQQLD-- 449

Human   432 LPNQAGKKKVSPDKMIEMQAKIDEERKALETKLDMEEEERNKARAELEKREKDLLKAQQEHQSLL 496
                      ..|:.|..|::..|:.|  |..::.||...| ||.|.|..:.::.:.|||::|..
  Fly   450 ----------DKDEEINQQSQYAEQLK--EQVMEQEELIAN-ARREYETLQSEMARIQQENESAK 501

Human   497 EKLSALEKKVIVGGVDLLAKAEEQEKLLEESNMELEERRKRAEQLRRELEEKEQERLDIEEKYTS 561
            |::.           ::|...||.....::.:.|::.:.|..:.|..||::|:........:...
  Fly   502 EEVK-----------EVLQALEELAVNYDQKSQEIDNKNKDIDALNEELQQKQSVFNAASTELQQ 555

Human   562 LQEEAQGKTKKLKKVWTMLMAAKSEMADLQQEHQREIEGLLENIRQLSRELRLQMLIIDNFIPRD 626
            |::.:..:.|::.::.|.|      :.||.:..|....|      :.|.:|::..|     ...|
  Fly   556 LKDMSSHQKKRITEMLTNL------LRDLGEVGQAIAPG------ESSIDLKMSAL-----AGTD 603

Human   627 YQEMIENYVHWNEDIGEW--QLKCVAYTGNNMRKQTPVPDKKEKDPFEVDLSHVYLAYTE----- 684
            ..::.|::......|.:.  :.|.:|...:||..|....:||..: :|.||....|..::     
  Fly   604 ASKVEEDFTMARLFISKMKTEAKNIAQRCSNMETQQADSNKKISE-YEKDLGEYRLLISQHEARM 667

Human   685 ESLRQSLMKLERPRTSKGKARPKTGRRKRSAKPETVIDSL 724
            :||::|:.:.|              .:||:.  |..||||
  Fly   668 KSLQESMREAE--------------NKKRTL--EEQIDSL 691

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KIF3ANP_001287720.1 KISc_KIF3 13..345 CDD:276822 156/335 (47%)
SMC_prok_B <450..>616 CDD:274008 35/165 (21%)
KhcNP_476590.1 KISc_KHC_KIF5 10..333 CDD:276820 156/335 (47%)
KISc 12..340 CDD:214526 157/341 (46%)
Apolipoprotein 595..744 CDD:279749 26/119 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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