DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment FAF1 and casp

DIOPT Version :10

Sequence 1:NP_008982.1 Gene:FAF1 / 11124 HGNCID:3578 Length:650 Species:Homo sapiens
Sequence 2:NP_611080.1 Gene:casp / 36769 FlyBaseID:FBgn0034068 Length:695 Species:Drosophila melanogaster


Alignment Length:710 Identity:244/710 - (34%)
Similarity:382/710 - (53%) Gaps:76/710 - (10%)


- Green bases have known domain annotations that are detailed below.


Human     1 MASNMDREMILADFQACTGIENIDEAITLLEQNNWDLVAAINGVIPQENGILQSEYGGETIPGP- 64
            |:.|.|.  .|..||:.|||:::.||.:.||..:|:||.|::.|||.|:..|.|.: ...:|.| 
  Fly     1 MSENKDE--ALTSFQSITGIDDVGEAFSHLEAADWNLVEALSRVIPHEDAPLTSPH-PILVPEPP 62

Human    65 ---------AFNPASHPASAPTSSSSSAFRPVM------------------PSRQIV-------- 94
                     .|.|........||::|..|...:                  |:.|::        
  Fly    63 ARNAVESTNGFRPPGFDEMPGTSNASGFFAAALQNQNQNLNLNQPHIQQRFPTSQLLAQLTSSIN 127

Human    95 -------ERQPRMLDFRVEYRDRNVDVVLEDTCTVGEIKQILENELQIPVSKMLLKGWKTGDVED 152
                   .....::.|.:.:..:...:.|....||.::|:.:..|..:||.:..::||......|
  Fly   128 LDPASSQNNNQNVITFNIHFNQQLYQLRLPSEATVEQLKRKIFAETSVPVCRQAIRGWPPSKASD 192

Human   153 S----TVLKSLHLPKNNSLYV--LTPDLPPPSSSSHAGALQESLNQNFMLIITHREVQREYNLNF 211
            :    |.|.:|.|...|.|.:  ||.|   ....:....:.:.::::|.:.|.. |......|:.
  Fly   193 AQQLGTRLCNLDLSPENELILVDLTED---GFMDTEQDEVTQRVDKDFTIFIQF-ESDPPLTLSL 253

Human   212 SGSSTIQEVKRNVYDLTSIPVRHQLWEGWPTSATDDSMCLAESGLSYPCHRLTV--GRRSSPAQT 274
            .|..|:||||.||:|:.|||||||.|.|||....:|: .||:||:.. .||..|  ..||:|..:
  Fly   254 PGRMTVQEVKMNVFDIKSIPVRHQEWTGWPNGCDNDT-TLAQSGIGL-SHRFAVRSTERSAPTNS 316

Human   275 REQSEEQITDVHMVSDSDGDDFEDATEFGVDDGEVFGMASSALRKSP---MMPENAENEGDALLQ 336
            .:.:...:..|.  |:|..|:|||||:|   :...:....|...:.|   ::|.:.::|.....|
  Fly   317 NQHNAFDVVTVD--SESSTDEFEDATDF---NNAEYIFTDSPPAQPPNRHLIPNDTDDEISGSTQ 376

Human   337 FTAEFSSRYGDCHPVFFIGSLEAAFQEAFYVKARDRKLLAIYLHHDESVLTNVFCSQMLCAESIV 401
            |...:.:|||:..|.||:||||.|.|.|....|::||||||||||.:|:|:||||.|::..|||:
  Fly   377 FVENYKARYGEPCPEFFVGSLENAKQLACLRSAKERKLLAIYLHHGKSILSNVFCDQLMKHESII 441

Human   402 SYLSQNFITWAWDLTKDSNRARFLTMCNRHFGSVVAQTIRTQKTDQFPLFLIIMGKR---SSNEV 463
            ....:.|:.:.||:|.:||:..||:.......|..:.|.|..|.|:.|..:::...|   |:.||
  Fly   442 QTFKEKFVLYGWDMTYESNKDMFLSSLTACISSNASLTARNIKLDKLPAIMLVGKSRQLGSNCEV 506

Human   464 LNVIQGNTTVDELMMRLMAAMEIFTAQQQEDIKDEDEREARENVKREQDEAYRLSLEA----DRA 524
            |:||.||..:|:|:.||:...|:|..|.|.:|:.||||.||:.||.|||.||:.:|:|    |.|
  Fly   507 LSVIHGNIGLDDLLTRLIETCEMFEEQLQVEIRQEDERAARDQVKAEQDMAYQETLQADMAKDAA 571

Human   525 KREAHEREMAEQFRLEQIRKEQEEEREAIRLSLEQALPPEPKEENAEPVSKLRIRTPSGEFLERR 589
            ||:....::||:.|:|..|.|::..||:|||..:|:||.||.|:.. ..||:|:|.|:|:|||||
  Fly   572 KRQKEAAQLAERKRMESERAEEDARRESIRLVAQQSLPQEPSEQET-GTSKIRVRKPTGDFLERR 635

Human   590 FLASNKLQIVFDFVASKGFPWDEYKLLSTFPRRDVTQLDPNKSLLEVKLFPQETLFLEAK 649
            |..:|.||.:.:||.:.||..:||||:|::||||:|.::.:::|..:||:||||:.||.:
  Fly   636 FFINNNLQDLLNFVTANGFLIEEYKLISSWPRRDLTAIESSQTLESLKLYPQETVILEER 695

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FAF1NP_008982.1 UBA_FAF1 14..46 CDD:270596 14/31 (45%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 62..87 8/34 (24%)
Ubl1_FAF1 100..172 CDD:340649 18/77 (23%)
Ubl_FAF1 195..268 CDD:340576 31/74 (42%)
UAS_FAF1 352..487 CDD:239288 58/137 (42%)
Mitofilin <490..>595 CDD:430783 51/108 (47%)
UBX_UBXN3A 571..649 CDD:340469 38/77 (49%)
caspNP_611080.1 UBA_FAF1 12..44 CDD:270596 14/31 (45%)
Ubl1_FAF1 140..215 CDD:340649 17/74 (23%)
Ubl2_FAF1 236..308 CDD:340650 32/74 (43%)
UAS_FAF1 392..530 CDD:239288 58/137 (42%)
tolA <531..>600 CDD:236545 30/68 (44%)
UBX_UBXN3A 616..695 CDD:340469 38/79 (48%)

Return to query results.
Submit another query.