Sequence 1: | XP_024307588.1 | Gene: | PTPRT / 11122 | HGNCID: | 9682 | Length: | 1535 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001260594.1 | Gene: | Lar / 35259 | FlyBaseID: | FBgn0000464 | Length: | 2032 | Species: | Drosophila melanogaster |
Alignment Length: | 1666 | Identity: | 423/1666 - (25%) |
---|---|---|---|
Similarity: | 664/1666 - (39%) | Gaps: | 483/1666 - (28%) |
- Green bases have known domain annotations that are detailed below.
Human 95 LKENDTHCID-------FHYYFSSRDRSSPGALNVYVKVNGGPQGNPVWNVSGVVTE------GW 146
Human 147 VKAELAISTFWPHFYQVIF--------ESVSLKGHPGYIAVDEVR--------VLAHPC-----R 190
Human 191 KAPHFLR----------------LQNVEVNVGQNATFQCIAGG---KWSQHDKLWLQQWNGRDTA 236
Human 237 LMVTRVVNHRRFSATVSVADTAQRSVSKYRCVIRSDGGSGVSNYAELIVKEP-PTPIAPPELLAV 300
Human 301 GATYLWIKPNANSIIGDGPIILKEVEYRTTTGTWAETHIVDSPNYKL-W---------------- 348
Human 349 -------HLDPDVEYEIRVL-------------LTRPGEGGTGPPGPPLTTRTKCADPVHGPQNV 393
Human 394 EIVDIRARQLTLQWEPFGYAVTRCHSYNLTVQY---------------------QYVFNQQQYEA 437
Human 438 EEVIQTSSHYTLRGLRPFMTIRLRLLLSNPEGRMESEELVVQTEEDVPGAVPLESIQGGPFEEKI 502
Human 503 YIQWKPPNETNGVITLYEINY-------------KAVGSLDPSADL------------------- 535
Human 536 ----SSQRGKV-----------------------------------FKLRNETHHLFVG------ 555
Human 556 ----------------------LYPGTTYSFTIKASTAK-GFGPPVTTRIATKISAPSMPEYDTD 597
Human 598 TPLNETD-------TTITVMLKPAQSRGAPVSVYQLVVKEERLQKSRRAADIIECFSVPVSY--- 652
Human 653 -----RNASSLDSLHYFAAELKPANLPVTQPFTVGDNKTYNGYWNPPLSPLKSYSIYFQALSKAN 712
Human 713 GETKINCVRLATKAP------MGSAQVTPG------TPLCLLTTGASTQNSNTVEPEKQVDNTVK 765
Human 766 MAGVIAGLLMFIIIL---LGVMLTIKRRRNAYSYSYYLKLAKKQKETQSGAQREMGPVASADKPT 827
Human 828 TKLSASRNDEGFSSSSQDVNGFTDGSRGELSQPTLTIQTHPYRTCDPVEMSYPRDQFQ------- 885
Human 886 PAIRVADLLQHITQMKRGQGYGFKEEYEALPEGQTASWDTAKEDENRNKNRYGNIISCRGRSPAK 950
Human 951 RADMRKTPQLDKEMSSVFPEAPLIQRRTLAATWDDHSRVRLLVLDGDPHSDYINANYIDGYHRPR 1015
Human 1016 HYIATQGPMQETVKDFWRMIWQENSASIVMVTNLVEVGRHPAEHTVGNATLGRAASPGMVKCVRY 1080
Human 1081 WPD-DTEVYGDIKVTLIETEPLAEYVIRTFTVQKKGYHEIRELRLFHFTSWPDHGVPCYATGLLG 1144
Human 1145 FVRQVKFLNPPEAGPIVVHCSAGAGRTGCFIAIDTMLDMAENEGVVDIFNCVRELRAQRVNLVQT 1209
Human 1210 EEQYVFVHDAILEACLCGNTAIPVCEFRSLYYNISRL---DPQTNSSQIKDEFQTLNIVTPRVRP 1271
Human 1272 EDCSIGLLPRNHDKNRSMDVLPLDRCLPFLISVDG-ESSNYINAALMDSHKQPAAFVVTQHPLPN 1335
Human 1336 TVADFWRLVFDYNCSSVVMLNEMDT--AQFCMQYWPEKTSGCYGPIQVEFVSADIDEDIIHRIFR 1398
Human 1399 ICNMARPQDG-YRIVQHLQYIGWPAYRDTPPSKRSLLKVVRRLEKWQEQYDGREGRTVVHCLNGG 1462
Human 1463 GRSGTFCAICSVCEMIQQQNIIDVFHIVKTLRNNKSNMVET 1503 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
PTPRT | XP_024307588.1 | MAM | 29..189 | CDD:214533 | 21/122 (17%) |
fn3 | 294..360 | CDD:306538 | 17/89 (19%) | ||
FN3 | 390..480 | CDD:238020 | 18/110 (16%) | ||
fn3 | 502..577 | CDD:306538 | 25/174 (14%) | ||
PTPc | 985..1222 | CDD:238006 | 119/237 (50%) | ||
PTPc | 1284..1504 | CDD:238006 | 71/224 (32%) | ||
Lar | NP_001260594.1 | Ig | 35..129 | CDD:299845 | |
I-set | 36..129 | CDD:254352 | |||
IG_like | 146..227 | CDD:214653 | |||
Ig | 159..228 | CDD:299845 | |||
I-set | 234..318 | CDD:254352 | |||
Ig3_RPTP_IIa_LAR_like | 249..317 | CDD:143216 | |||
fn3 | 324..404 | CDD:278470 | |||
FN3 | 423..514 | CDD:238020 | |||
FN3 | 520..610 | CDD:238020 | 5/39 (13%) | ||
FN3 | 616..707 | CDD:238020 | 18/90 (20%) | ||
FN3 | 712..810 | CDD:238020 | 16/102 (16%) | ||
FN3 | 832..907 | CDD:238020 | 14/79 (18%) | ||
FN3 | 914..1005 | CDD:238020 | 22/128 (17%) | ||
FN3 | 1012..1101 | CDD:238020 | 19/90 (21%) | ||
fn3 | 1106..1198 | CDD:278470 | 9/91 (10%) | ||
PTPc | 1476..1731 | CDD:214550 | 134/315 (43%) | ||
PTPc | 1503..1731 | CDD:238006 | 125/288 (43%) | ||
PTPc | 1763..2022 | CDD:214550 | 78/254 (31%) | ||
PTPc | 1791..2022 | CDD:238006 | 71/224 (32%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E2759_KOG4228 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |