DRSC/TRiP Functional Genomics Resources

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Protein Alignment PTPRT and Ptp36E

DIOPT Version :9

Sequence 1:XP_024307588.1 Gene:PTPRT / 11122 HGNCID:9682 Length:1535 Species:Homo sapiens
Sequence 2:NP_001286033.1 Gene:Ptp36E / 35091 FlyBaseID:FBgn0267486 Length:682 Species:Drosophila melanogaster


Alignment Length:560 Identity:188/560 - (33%)
Similarity:296/560 - (52%) Gaps:52/560 - (9%)


- Green bases have known domain annotations that are detailed below.


Human   985 DHSRVRLLVLDGDPHSDYINANYIDGYHRPRHYIATQGPMQETVKDFWRMIWQENSASIVMVTNL 1049
            |::||.|..:.|...|||:||:|:|...:|..||.||||::|||:.:|||:||||.::|||:|..
  Fly   138 DYNRVVLEKVGGLQDSDYVNASYVDSLLKPNAYIVTQGPVEETVQAYWRMVWQENISAIVMLTKT 202

Human  1050 VEVGRHPAEHTVGNATLGRAASPGMVKCVRYWPDDTEV---YGDIKVTLIETEPLAEYVIRTFTV 1111
            .:..:                    |.|.:|||.:.||   ||||.:.::..|.||.:.||||.:
  Fly   203 FDFAK--------------------VMCHQYWPPNMEVHEQYGDIFINIVREEQLANFHIRTFRL 247

Human  1112 QKKG-YHEIRELRL---FHFTSWPDHGVPCYATGLLGFVRQVKFL-------NPPEAGPIVVHCS 1165
            .|.. ..|:.:.||   ||:|.|..|..| ::..||.|.|:|:.:       .....|||:||||
  Fly   248 YKMNEKQEVTDERLILQFHYTEWYSHSCP-FSNALLEFRRRVRLVVGNIIKDEDDMRGPILVHCS 311

Human  1166 AGAGRTGCFIAIDTMLDMAENEGVVDIFNCVRELRAQRVNLVQTEEQYVFVHDAILEACLCGNTA 1230
            .|.||:|.:::||..|::||.|...::|..:::||..|..||:..|||.|::|.:.|..:||.|.
  Fly   312 DGGGRSGVYMSIDANLELAEEEECFNVFGYLKKLRQSRKGLVENVEQYKFIYDTLEEHIICGKTW 376

Human  1231 IPVCEFRSLYYNISRLDPQTNSSQIKDEFQTLNIVTPRVRPEDCSIGLLPRNHDKNRSMDVLPLD 1295
            .||.|........:|.:..|..::.:.|:..:...|||....||:.|....|.:|||.:..:|.|
  Fly   377 FPVSELSDRLKAKARRNSGTKMNEYQAEYDQICKQTPRFTIGDCAGGHRADNREKNRDVLCVPPD 441

Human  1296 RCLPFLISVDGES-SNYINAALMDSHKQPAAFVVTQHPLPNTVADFWRLVFDYNCSSVVMLNEMD 1359
            ...|:|.|..|.: ::|||:..:|.:.:|..::||:.|:.:|:.:||.||:|..||:||:|.:..
  Fly   442 NFRPYLTSFQGNAFTDYINSVFVDGYTKPREYIVTEWPMKHTLGEFWSLVYDQECSAVVVLCQPP 506

Human  1360 T-AQFCMQYWPEKTS-GCYGPI-QVEFVSADIDEDIIHRIFRICN--------MARPQDGYRIVQ 1413
            : :|....:||.|:. ..|||: .|.:|.:....:|....|:|..        ||..:...|.||
  Fly   507 SQSQQYPSFWPNKSKMEKYGPVFSVHYVMSKSYTNIKQWEFKINKKIVSLTEMMAGVKAPTRTVQ 571

Human  1414 HLQYIGWPAYRDTPPSKRSLLKVVRRLEKWQEQYDGREGRTVVHCLNGGGRSGTFCAICSVCEMI 1478
            ..|...||.....|.|..||:.::..:|.|:.:.|  .|...|...:|..|:|.:||..:..|.:
  Fly   572 LFQLTCWPMGHKVPSSTNSLVYLMNMVEIWRNKVD--YGPVCVVSPDGRSRAGVYCAANACIEQV 634

Human  1479 QQQNIIDVFHIVKTLRNNKSNMVETL---RLCKGTLLHTV 1515
            .|...:|||..|||:|.::..:||.:   :.|...:||.|
  Fly   635 IQHGEVDVFQAVKTVRRHRPQLVENMTEYKYCYDLVLHYV 674

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PTPRTXP_024307588.1 MAM 29..189 CDD:214533
fn3 294..360 CDD:306538
FN3 390..480 CDD:238020
fn3 502..577 CDD:306538
PTPc 985..1222 CDD:238006 94/250 (38%)
PTPc 1284..1504 CDD:238006 73/231 (32%)
Ptp36ENP_001286033.1 Y_phosphatase 125..368 CDD:395053 94/250 (38%)
Y_phosphatase 428..671 CDD:395053 75/244 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG4228
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000829
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
43.770

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