Protein Alignment PTPRT and F55H12.5

DIOPT Version :9

• Sequence 1: XP_024307588.1
• Gene: PTPRT / 11122
• HGNCID: 9682
• Length: 1535
• Species: Homo sapiens
• Sequence 2: NP_492395.2
• Gene: F55H12.5 / 172700
• WormBaseID: WBGene00010136
• Length: 287
• Species: Caenorhabditis elegans
• Alignment Length: 241
• Identity: 50/241 - (20%)
• Similarity: 92/241 - (38%)
• Gaps: 50/241 - (20%)

Human   986 HSRVRLLVLDGDPHSDYINANYIDGYHRPRHYIATQGPMQ-ETVKDFWRMIWQENSASIVMVTNL 1049
            :...|::|    |..||.:|:::||. :|..||..|.|.. ...|||::::
 Worm    89 YDATRVIV----PGVDYYHASWVDGL-KPNQYILAQAPRDASAAKDFFKLL-------------- 134

Human  1050 VEVGRHPAEHTVGNATLGRAASPGMVKCVRYWPDDTEVYGDIKVTLIETEPLAEYVIRTFTVQKK 1114
                    ||         ..:.|::..     :..:.:........|........:.|..:::.
 Worm   135 --------EH---------VKAEGLIVA-----EGADEFSSAITAKFEKGTGKNDFVSTAVIKEN 177

Human  1115 GYHEIRELRLFHFTSWPDHGVPCYATGLLGFV-RQVKFLNPPEAGPIVVHCSAGAGRTGCFIAID 1178
            |.|    |:...|..|.:   |..|..:...: :..|:|..|..||:|:.|..||.::|....||
 Worm   178 GLH----LKAIKFCRWAE---PLSAIEINDMLEKSRKYLGCPLKGPLVIVCKDGAAKSGLVAFID 235

Human  1179 TMLDMAENEGVVDIFNCVRELRAQRVNLVQTEEQYVFVHDAILEAC 1224
            |..|.....|.....:.::::|..|.|...|.:.|....::::|.|
 Worm   236 TEADRLMKHGKAKHTDTIKQIRFMRSNTFDTFDSYDLGINSLIELC 281

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
PTPRT	XP_024307588.1	MAM	29..189	CDD:214533
		fn3	294..360	CDD:306538
		FN3	390..480	CDD:238020
		fn3	502..577	CDD:306538
		PTPc	985..1222	CDD:238006	48/237 (20%)
		PTPc	1284..1504	CDD:238006
F55H12.5	NP_492395.2	PTPc	74..270	CDD:214550	47/228 (21%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E2759_KOG4228
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	1	0.950	-	0	Normalized mean entropy	S12334
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	2.760