DRSC/TRiP Functional Genomics Resources

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Protein Alignment CIT and tip1

DIOPT Version :10

Sequence 1:XP_011536085.1 Gene:CIT / 11113 HGNCID:1985 Length:2084 Species:Homo sapiens
Sequence 2:NP_593613.1 Gene:tip1 / 2543044 PomBaseID:SPAC3C7.12 Length:461 Species:Schizosaccharomyces pombe


Alignment Length:505 Identity:98/505 - (19%)
Similarity:178/505 - (35%) Gaps:179/505 - (35%)


- Green bases have known domain annotations that are detailed below.


Human   699 SLENKVKRLETMERRENRLKDDIQTKSQQIQQMADKILELEEKHREAQVSAQHLEVHLKQKEQHY 763
            :|::.:.||..:....|.   .:.|.|.......:|||:            :.:|..|.:::.|.
pombe   104 NLQSSIPRLTNVSSSSNL---SMNTISSTALTPTEKILQ------------KRIEDLLYERQNHQ 153

Human   764 EEKIKVLDNQIKKDLADKETLENMMQRHEEEAHEKGKILSEQKAMINAMDSKIRSLEQRIVELSE 828
            :        |:::.||..:.|::::....::..|           ::.:..:|...|:||     
pombe   154 Q--------QLEEVLATVDQLQSLVTNFNDQQDE-----------VDELRERITLKEERI----- 194

Human   829 ANKLAANSSLFTQRNMKAQEEMISELRQQKFYLETQAGKL-EAQNRKLEEQLEKISHQDHSDKNR 892
                               ::|.:|..|::|..:|....| |:.||.:|           :.:||
pombe   195 -------------------QQMRNEASQRRFEFKTTIECLEESSNRAIE-----------TYENR 229

Human   893 LLELETRLREVSLEHEEQKLELKRQLTELQLSLQERESQLTALQAARAALESQLRQAKTELEETT 957
            :.|||.:|........|..|     |..||   |||:..|..::..:..:::.::|.        
pombe   230 IAELEAQLEMYMSGKSEDDL-----LFSLQ---QERDYALNQVEILQERVDTLMKQK-------- 278

Human   958 AEAEEEIQALTAHRDEIQRKFDALRNSCTVITDLEEQLNQLTEDNAELNNQNFYLSKQLDEASGA 1022
                                    .||.|.    .|:|:.:...:..|.|.:|...|:   ..|:
pombe   279 ------------------------ANSSTA----NEKLSHMESSSPTLTNASFESPKR---GKGS 312

Human  1023 NDEIVQLRSEVDHLRREITEREMQLTSQKQTMEALKTTCTMLEEQVMDLEALNDE------LLEK 1081
            ||               :.|...|   ::||:|..:....:|.|:|..|:||:||      .|||
pombe   313 ND---------------LPENHPQ---RRQTLEFYEIEIEVLREKVEKLQALSDEKDFYISKLEK 359

Human  1082 ERQWEAWRSVLGD--------EKSQFECRVRELQRMLDTEKQSRARADQRIT------ESRQVVE 1132
            .........|..|        ||.....|:.||:..::....:..|.::|::      |:.|.||
pombe   360 SLDRNDTTPVPSDEKLSNYAAEKENLVSRISELEHTIEQLTINNERDNERMSPAEFELETTQEVE 424

Human  1133 LAVKEHKAEILALQQALKEQKLKAESLSDKLNDLEKKHAMLEMNARSLQQ 1182
                                    |:.||..:|.|....:.|.|..|||:
pombe   425 ------------------------ENDSDSHDDEETWCEVCETNNHSLQE 450

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CITXP_011536085.1 STKc_CRIK 95..422 CDD:270752
CwlO1 442..>598 CDD:443091
SMC_prok_B 531..1343 CDD:274008 98/505 (19%)
CRIK 1401..1456 CDD:410364
PH 1486..1605 CDD:459697
CNH 1650..1946 CDD:214481
tip1NP_593613.1 CAP_GLY 4..74 CDD:214997
SMC_prok_B <142..399 CDD:274008 73/375 (19%)
Blue background indicates that the domain is not in the aligned region.

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