DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CIT and citk-2

DIOPT Version :10

Sequence 1:XP_011536085.1 Gene:CIT / 11113 HGNCID:1985 Length:2084 Species:Homo sapiens
Sequence 2:NP_494921.1 Gene:citk-2 / 173864 WormBaseID:WBGene00019087 Length:1286 Species:Caenorhabditis elegans


Alignment Length:1544 Identity:327/1544 - (21%)
Similarity:605/1544 - (39%) Gaps:392/1544 - (25%)


- Green bases have known domain annotations that are detailed below.


Human   529 SQEDDK-----ALQLLHDIREQSRKLQE------------IKEQEYQAQVEEMRLM---MNQLEE 573
            |.||.|     |..::.|:|.:...|.|            |.||..:...:|.|:.   :|.||:
 Worm    43 SHEDLKKRVLDAENIIQDLRSERDALHETLVDKAGLNESVIIEQSKRVSTQETRIYRRDVNLLED 107

Human   574 DLVSARRRSDLYESELR--ESRLAAEEFKRKATECQHKLLKAKDQGKPEVGEY----AKLEKINA 632
            ||..       ::|::|  :::.:..|.:::.  .|..:.:|:|..|....|.    ::|..:..
 Worm   108 DLKH-------HQSQIRILQNKCSTLEMEKQT--LQETIQRAQDDKKETETELESSRSRLHVLEK 163

Human   633 EQQLK-------IQELQEKLEKAVKASTEATELLQNIRQAKERAERELEKLQNREDSSEGIRKKL 690
            |...|       .::|.:|.|:......|....|....:.|:..|.:|||.:|  |..|..||.|
 Worm   164 ELSAKANDIFMVTKDLHDKNEELTSFRMEYVTKLSEANREKKALEEKLEKYKN--DMKENDRKSL 226

Human   691 VEAEERRHSLENKVKRLETMERRENRLKDDIQTKSQQIQQMADKILELEEKHREAQVSAQHLEVH 755
             |..:.:.:.:|.:..:..:......|        ..:::.|.||.||:|.|   |:||:.:|..
 Worm   227 -ELNKEQVTTQNVLSEVRQLSAHFEFL--------TPVRKNASKIRELDEYH---QLSAKVIEES 279

Human   756 LKQKEQHYEEKIKVLDNQIKKDLADK--------ETLENMMQR------HEEEA----HEKGKIL 802
            :..        :|:.:..:.|:|:||        |.||::.|.      ..|:|    ||:...|
 Worm   280 MND--------LKIKNETLTKELSDKTELVKMKNEELEDLRQTTTASLGDSEQATKYLHEENMKL 336

Human   803 SEQKAMINAMDSKIRSLEQRIVELSEANKLAANSSLFTQRNMKAQEEMISE---LRQQKFYLETQ 864
            :.|||.|..             ||.||.:.........|...|.:::.:::   :|:.|..:|.:
 Worm   337 TRQKADIRC-------------ELLEARRKVEGFDKLKQELEKERDDALADVQKIREVKRNVERE 388

Human   865 AGKLEAQNRKLEEQLEKISHQDHSDKNRLLELETRLREVSLEHEEQKLELKR---QLTELQLSLQ 926
            ...|.:...:.:||:|::       |.::...|.    :..:||..|.||.|   :|.::...|.
 Worm   389 LQSLTSLMAERDEQIEEL-------KTKMFSFEM----IKKDHESAKNELSRTQEKLDQMGKHLI 442

Human   927 ERESQLTALQAARAALESQLRQA--------------KTELEETTAEAEEEIQALTAHRDEIQRK 977
            ..:.|.:..::.:.:.|...|:|              :|.| |:..:.|:|::.|.|......:|
 Worm   443 MADQQCSTFKSLKESAEGSRRRAIEQCNEMVVRIRDLQTSL-ESQRKVEQEVEMLKAENSRQAKK 506

Human   978 FDALRNSC-TVITDLEEQLNQLTEDNAELNNQNFYLSKQLDEASGANDEIVQLRSEVDHLRREIT 1041
            .:.::... .|..|..::|::|.|                 :..|..|        .||||..::
 Worm   507 IEFMKEEIQEVHLDYRQELSRLAE-----------------KTKGKED--------ADHLRLTLS 546

Human  1042 EREMQLTSQKQTMEALKTTCTMLEEQVMDLEALNDELLEKERQWEAWRSVLGDEKSQFECRVREL 1106
            :|:.:|.|.|:|::.:|.                                               
 Worm   547 QRDSELRSAKKTIQEVKA----------------------------------------------- 564

Human  1107 QRMLDTEKQSRARADQRITESRQVVELAVKEHKAEILALQQALKEQKLKAESLSDKLNDLEKKHA 1171
                |.:|.             |::.:.|::|:.:|  |::.::.:|..|::|           |
 Worm   565 ----DNQKV-------------QLMLVEVRQHQEKI--LEENVRLRKGMADAL-----------A 599

Human  1172 MLEMNARSLQQKLETERELKQRLLEEQAKLQQQMDLQKNHIFRLTQGLQEALDRADLLKTERSDL 1236
            .:|...||.|...||    .:||..|.|..:.::|       :|.:.|||...:.    .|..:|
 Worm   600 KIEEYKRSWQNSQET----CERLERESATKEDKLD-------KLEEELQEKKQQI----AESKEL 649

Human  1237 EYQLENIQVLYSHEKVKMEGTISQQTKLIDFLQAKMDQPAKKKKGLFSRRKEDPALPTQVPLQYN 1301
                    |.|.|.::.     ::|||     |.|:.    ::..|.|...|   :.|.|.::  
 Worm   650 --------VTYLHSQID-----AKQTK-----QPKLG----RRSTLLSTVSE---MDTSVYMR-- 687

Human  1302 ELKLALEKEKARCAELEEALQKTRIELRSAREEAAHRKATDHPHPSTPATARQQIAMSAIVRSPE 1366
                  |.|:.|.  |||..|.....|...|.:....|.:            |..|.:.||.:..
 Worm   688 ------EAEEVRA--LEEQRQALMSNLAEKRRQLVDSKKS------------QSTANTTIVTTTT 732

Human  1367 HQPSAMSLLAPPSSRRKESSTPEEFSRRLKERMHHNIPHRF----NVG-LNMRATKCAVCLDTVH 1426
            .:.|            |.|.:..|.|.| :..|.|:|||::    :|| |:|   ||::|...:.
 Worm   733 TEIS------------KSSQSASELSNR-QGTMRHDIPHKWKAFRHVGVLSM---KCSLCFVGIS 781

Human  1427 FGRQASKCLECQVMCHPKCSTCLPATCGLPAEYATHFTEAFCRDKMNSPGLQTKEPSSSLHLEGW 1491
            ...:|.||..|.|..|..|:..:..|||:|.:.||::.|.  ...::|.|:      |...:.||
 Worm   782 AFAKAKKCSHCDVHVHASCAPRVNNTCGMPLQCATYYREN--HTTVSSSGV------SEGRMNGW 838

Human  1492 MKVPRNNKRGQQGWDRKYIVLEGSKVLIYDNEAREAGQRPVEEFELCLPDGDVSIHGAVGASELA 1556
            ::|.|::..|.. |...:.:::.:::..|.|:..:. ::|....:| ..:..|...|.....:..
 Worm   839 LRVYRDDMTGST-WIASWAMMDLTRISFYTNDGADL-EKPFFSIDL-NKEQWVLRTGQEMPVDCD 900

Human  1557 NTAKADVPYILKMESHPHTTCWPGRTLYLLAPSFPDKQRWVTALESVVAGGRVSREKAEADAARD 1621
            ::.:|:...::||         |.|.||:||||.|..:||...|::......:...|..:.|...
 Worm   901 DSMRANNVLMIKM---------PRRCLYILAPSQPSARRWAECLQTAQRKRMMLNSKESSIAEFT 956

Human  1622 CVSYELLPAWVQKLLGNSLLKLEGDDRLDMNCTLPFSDQVVLVGTEEGLY--ALNVLKNSLTHVP 1684
            |                 ||.|...:.|.:.......|. :|..|:.||:  :::..:|.: .:.
 Worm   957 C-----------------LLVLNSPNNLKIFKAYTIEDW-ILFATQTGLFFTSISQPRNPM-RIA 1002

Human  1685 GIGAVFQIYIIKDLEKLLMIAGEERALCLVDVKKVKQSLAQSHLPAQPDISPNIFEAVKGCHLFG 1749
            |..:|..:.|:.:::.:.|:|.....|.::.:    .||..:....||.|.|.|....:..|:..
 Worm  1003 GPNSVTSLEIMAEIKCVAMVANSSGQLAMIPL----DSLILAMQSTQPSIRPEILPEFEHVHMIK 1063

Human  1750 AGKIENGLCICAAMPSKVVILRYNENLSKYCIRKEIETSEPCSCIHFTNYSILIGTNKFYEIDMK 1814
            ..:......:..:..:.:.:.:||.....:....:.:..||.|.|......|:...:.||.:.:.
 Worm  1064 YHQQNGQRFLLISDDTHLHVRKYNATRDIFSQYAKFDVPEPISFIESAPSGIIFACDTFYYVALD 1128

Human  1815 QYTLEEFLDKNDHSLAPAVFAASSNSFPVSIVQVNSAGQREEYLLCFHEFGVFVDSYGRRSRTDD 1879
            ..|       :.:..|..:.:.:.|.||:|...:|    :.|.||.:...|:||:.:|.:||.:.
 Worm  1129 HQT-------SSNVSARKLMSPNKNEFPISAQMIN----QNEVLLAYQNQGIFVNLHGEQSRNET 1182

Human  1880 LKWSRLPLAFAYREPYLFVTHFNSLEVIEIQARSSAGTPA-RAYLDIPNPRYLGPAISSGAIYLA 1943
            ::|.::|:.|.|..|:|::.|.:|:|::||...|.....| ||..:..|...:|.......|.::
 Worm  1183 IEWEKMPMEFIYTSPFLYIVHDDSIEILEISETSDRTVLAERALFECVNAHVIGRQYEGVLISVS 1247

Human  1944 SSYQDKLRVICCKGNLVKESGTEHHR-----GPSTSRSSPNKRGPPTYN 1987
            |:                 ..||.||     |.....:...:||...||
 Worm  1248 SN-----------------DSTEVHRFSTATGQKQKNNVSKRRGASPYN 1279

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CITXP_011536085.1 STKc_CRIK 95..422 CDD:270752
CwlO1 442..>598 CDD:443091 21/90 (23%)
SMC_prok_B 531..1343 CDD:274008 180/883 (20%)
CRIK 1401..1456 CDD:410364 21/59 (36%)
PH 1486..1605 CDD:459697 27/118 (23%)
CNH 1650..1946 CDD:214481 64/298 (21%)
citk-2NP_494921.1 SMC_prok_B 49..>717 CDD:274008 176/875 (20%)
C1 754..811 CDD:412127 21/59 (36%)
PH 835..940 CDD:459697 27/116 (23%)
CNH 965..1248 CDD:214481 64/299 (21%)
Blue background indicates that the domain is not in the aligned region.

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