Protein Alignment SNRNP35 and SNP1

DIOPT Version :9

• Sequence 1: NP_851030.1
• Gene: SNRNP35 / 11066
• HGNCID: 30852
• Length: 251
• Species: Homo sapiens
• Sequence 2: NP_012203.1
• Gene: SNP1 / 854749
• SGDID: S000001323
• Length: 300
• Species: Saccharomyces cerevisiae
• Alignment Length: 231
• Identity: 66/231 - (28%)
• Similarity: 102/231 - (44%)
• Gaps: 48/231 - (20%)

Human    14 KEYDPLKAGSIDGT------------DEDPHDRAVWRAMLARYVPNKGVIGDPLLTLFVARLNLQ 66
            :.|:.:|...|...            :.|||.:..                ||..|:|:.||...
Yeast    69 QRYEDIKLSKIKNAQLLDRRLQNWNPNVDPHIKDT----------------DPYRTIFIGRLPYD 117

Human    67 TKEDKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYKEERAVIKAYRDAD---GLVIDQHEIF 128
            ..|.:|::.|.::|:|.::|:|:|.:|..|||||||.:|:..:...|:::..   |:.|......
Yeast   118 LDEIELQKYFVKFGEIEKIRIVKDKITQKSKGYAFIVFKDPISSKMAFKEIGVHRGIQIKDRICI 182

Human   129 VDYELERTLKGWIPRRLGGGLGGKKESGQLRFGGRDRPFRKP-------INLPVVKNDLYREGKR 186
            ||.|..||:|.:.||||||||||:        |..:|..|.|       .:.|..:|...|..:|
Yeast   183 VDIERGRTVKYFKPRRLGGGLGGR--------GYSNRDSRLPGRFASASTSNPAERNYAPRLPRR 239

Human   187 ERRERSRSRERHWDSRTRDRDHDRGREKRWQEREPT 222
            |....:.|.:| :.|.|.|..: ||.........||
Yeast   240 ETSSSAYSADR-YGSSTLDARY-RGNRPLLSAATPT 273

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SNRNP35	NP_851030.1	RRM_snRNP35	53..142	CDD:240683	32/91 (35%)
SNP1	NP_012203.1	U1snRNP70_N	6..95	CDD:403437	3/25 (12%)
		RRM_SNP1_like	89..201	CDD:410194	39/127 (31%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0724
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	1	1.000	-	-		otm52920
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	2.810