DRSC/TRiP Functional Genomics Resources

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Protein Alignment CHD1 and Mi-2

DIOPT Version :9

Sequence 1:NP_001351042.1 Gene:CHD1 / 1105 HGNCID:1915 Length:1798 Species:Homo sapiens
Sequence 2:NP_001014591.1 Gene:Mi-2 / 40170 FlyBaseID:FBgn0262519 Length:1983 Species:Drosophila melanogaster


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CHD1NP_001351042.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..252
CHROMO 306..355 CDD:237991
Chromo 389..443 CDD:306815
SNF2_N 464..>1000 CDD:331286
DEAH box 614..617
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1080..1120
DUF4208 1496..1586 CDD:316429
DUF1777 1672..>1781 CDD:312240
Mi-2NP_001014591.1 CHDNT 138..190 CDD:285335
PHD1_CHD_II 380..422 CDD:277006
PHD2_CHD_II 440..482 CDD:277007
CHROMO 490..558 CDD:237991
CHROMO 615..667 CDD:214605
SNF2_N 734..1028 CDD:278600
DEXDc 751..907 CDD:238005
Helicase_C 1053..1167 CDD:278689
DUF1087 <1292..1337 CDD:283996
DUF1086 1380..1517 CDD:283992
CHDCT2 1756..1927 CDD:285336
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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