DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SLC35D2 and sqv-7

DIOPT Version :9

Sequence 1:NP_008932.2 Gene:SLC35D2 / 11046 HGNCID:20799 Length:337 Species:Homo sapiens
Sequence 2:NP_495436.1 Gene:sqv-7 / 174145 WormBaseID:WBGene00005025 Length:329 Species:Caenorhabditis elegans


Alignment Length:314 Identity:155/314 - (49%)
Similarity:211/314 - (67%) Gaps:19/314 - (6%)


- Green bases have known domain annotations that are detailed below.


Human    26 ARLLSALFYGTCSFLIVLVNKALLTTYGFPSPIFLGIGQMAATIMILYVSKLNKIIHFPDFDKKI 90
            :|:.||:|||..|.|||.|||.|||.|.|||.:|:|:|||.|||:||:.:|:.:|:.||..|..|
 Worm    11 SRVFSAVFYGVISVLIVFVNKILLTNYKFPSFLFVGVGQMMATILILFFAKMFRIVQFPSLDSSI 75

Human    91 PVKLFPLPLLYVGNHISGLSSTSKLSLPMFTVLRKFTIPLTLLLETIILGKQYSLNIILSVFAII 155
            |.|:.||||||..|.||||..|..::||||||||:|:|.:|::||..||..:.|..:.:||..:|
 Worm    76 PRKIMPLPLLYFFNLISGLGGTQMINLPMFTVLRRFSILMTMILEFYILNVKASKAVKISVGLMI 140

Human   156 LGAFIAAGSDLAFNLEGYIFVFLNDIFTAANGVYTKQKMDPKELGKYGVLFYNACFMIIPTLIIS 220
            .|:||||..||:|:..||..:|:|:|.|||.|||||||:|.|:|||||::|||..||::|.|.:.
 Worm   141 GGSFIAAIYDLSFDALGYTMIFINNICTAALGVYTKQKLDAKDLGKYGLMFYNCLFMLLPALCVV 205

Human   221 VSTGDLQQATEF--------NQWKNVVFILQFLLSCFLGFLLMYSTVLCSYYNSALTTAVVGAIK 277
            ..||||.:|..|        :.|      ..|||||..||:|.||.|||:::||||||..||.||
 Worm   206 QYTGDLDRAYSFMLSDSMTSSVW------TCFLLSCICGFVLNYSLVLCTHHNSALTTTCVGPIK 264

Human   278 NVSVAYIGILIGGDYIFSLLNFVGLNICMAGGLRYSFLTLSSQ-----LKPKPV 326
            |:.|.|:|:...|||:|...||.|:|:.:.|.:.|:::|..|:     .||.|:
 Worm   265 NLFVTYVGMFSSGDYVFQWANFTGINVSVFGSILYTYVTFRSKSTTISYKPLPM 318

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SLC35D2NP_008932.2 TPT 28..325 CDD:331565 153/309 (50%)
sqv-7NP_495436.1 TPT 21..299 CDD:281186 143/283 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C161464692
Domainoid 1 1.000 309 1.000 Domainoid score I802
eggNOG 1 0.900 - - E1_COG5070
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 329 1.000 Inparanoid score I1650
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG55087
OrthoDB 1 1.010 - - D1093260at2759
OrthoFinder 1 1.000 - - FOG0002341
OrthoInspector 1 1.000 - - otm16462
orthoMCL 1 0.900 - - OOG6_102424
Panther 1 1.100 - - O PTHR11132
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R503
SonicParanoid 1 1.000 - - X1771
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1413.840

Return to query results.
Submit another query.