DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SLC35D2 and slc35d2

DIOPT Version :9

Sequence 1:NP_008932.2 Gene:SLC35D2 / 11046 HGNCID:20799 Length:337 Species:Homo sapiens
Sequence 2:XP_002935028.2 Gene:slc35d2 / 100493448 XenbaseID:XB-GENE-966209 Length:355 Species:Xenopus tropicalis


Alignment Length:309 Identity:197/309 - (63%)
Similarity:248/309 - (80%) Gaps:0/309 - (0%)


- Green bases have known domain annotations that are detailed below.


Human    23 SRVARLLSALFYGTCSFLIVLVNKALLTTYGFPSPIFLGIGQMAATIMILYVSKLNKIIHFPDFD 87
            :|...:||||||...|.||:||||.:||.|.|||..|||:||||.||:||||.||.:||.|||||
 Frog    10 TRNVLILSALFYAASSLLIILVNKTVLTIYRFPSSTFLGVGQMAITILILYVGKLYQIISFPDFD 74

Human    88 KKIPVKLFPLPLLYVGNHISGLSSTSKLSLPMFTVLRKFTIPLTLLLETIILGKQYSLNIILSVF 152
            :::|.|||||||||:|||::|||||.|||||||||||||:|||||:||.|||.|::..:::.||.
 Frog    75 RQVPKKLFPLPLLYIGNHLTGLSSTQKLSLPMFTVLRKFSIPLTLILEMIILRKRFPFSVVSSVT 139

Human   153 AIILGAFIAAGSDLAFNLEGYIFVFLNDIFTAANGVYTKQKMDPKELGKYGVLFYNACFMIIPTL 217
            .||:||.|||..||:|||||||.|.|||:|||:.|||||:|:|||||||||||||||.|||:|||
 Frog   140 TIIMGALIAASFDLSFNLEGYILVLLNDLFTASYGVYTKEKIDPKELGKYGVLFYNASFMILPTL 204

Human   218 IISVSTGDLQQATEFNQWKNVVFILQFLLSCFLGFLLMYSTVLCSYYNSALTTAVVGAIKNVSVA 282
            |.::.:||.:.|..|::|.|:.||:||:.:|.:||:|:||.||||||:|||||.|:|::||||:|
 Frog   205 IYTILSGDFELAIHFSEWTNIAFIVQFIFACMMGFILLYSIVLCSYYHSALTTTVIGSLKNVSIA 269

Human   283 YIGILIGGDYIFSLLNFVGLNICMAGGLRYSFLTLSSQLKPKPVGEENI 331
            |:||.:||||.||..||||||||||||:.||..|:....|....|:..:
 Frog   270 YVGIFVGGDYSFSWFNFVGLNICMAGGVAYSLSTIFGDTKTMDNGKPKL 318

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SLC35D2NP_008932.2 TPT 28..325 CDD:331565 195/296 (66%)
slc35d2XP_002935028.2 TPT 13..300 CDD:421389 191/286 (67%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 408 1.000 Domainoid score I5764
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H68119
Inparanoid 1 1.050 414 1.000 Inparanoid score I8895
NCBI 1 1.000 - -
OMA 1 1.010 - - QHG55087
OrthoDB 1 1.010 - - D1093260at2759
OrthoFinder 1 1.000 - - FOG0002341
OrthoInspector 1 1.000 - - oto152061
Panther 1 1.100 - - LDO PTHR11132
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1771
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1212.080

Return to query results.
Submit another query.