DRSC/TRiP Functional Genomics Resources

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Protein Alignment RIPK3 and Ripk3

DIOPT Version :9

Sequence 1:NP_006862.2 Gene:RIPK3 / 11035 HGNCID:10021 Length:518 Species:Homo sapiens
Sequence 2:NP_064339.2 Gene:Ripk3 / 56532 MGIID:2154952 Length:486 Species:Mus musculus


Alignment Length:497 Identity:299/497 - (60%)
Similarity:347/497 - (69%) Gaps:23/497 - (4%)


- Green bases have known domain annotations that are detailed below.


Human     1 MSCVKLWPSGAPA-PLVSIEELENQELVGKGGFGTVFRAQHRKWGYDVAVKIVNSKAISREVKAM 64
            ||.|||||:||.| ||||.|||:..|.|||||||.||||.||.|.:||||||||||.||.|||||
Mouse     1 MSSVKLWPTGASAVPLVSREELKKLEFVGKGGFGVVFRAHHRTWNHDVAVKIVNSKKISWEVKAM 65

Human    65 ASLDNEFVLRLEGVIEKVNWDQDPKPALVTKFMENGSLSGLLQSQCPRPWPLLCRLLKEVVLGMF 129
            .:|.||.||.|.||.|.:.||.....||||:|||||||:||||.:||||||||||||:||||||.
Mouse    66 VNLRNENVLLLLGVTEDLQWDFVSGQALVTRFMENGSLAGLLQPECPRPWPLLCRLLQEVVLGMC 130

Human   130 YLHDQNPVLLHRDLKPSNVLLDPELHVKLADFGLSTFQGGSQSGTGSG----EPGGTLGYLAPEL 190
            |||..||.||||||||||:|||||||.|||||||||||||||||:|||    :.||||.||.|||
Mouse   131 YLHSLNPPLLHRDLKPSNILLDPELHAKLADFGLSTFQGGSQSGSGSGSGSRDSGGTLAYLDPEL 195

Human   191 FVNVNRKASTASDVYSFGILMWAVLAGREVELPTEPSLVYEAVCNRQNRPSLAELPQAGPETPGL 255
            ..:||.|||.||||||||||:||||||||.||..:.||:.|.||:||:||.|.|||...||||||
Mouse   196 LFDVNLKASKASDVYSFGILVWAVLAGREAELVDKTSLIRETVCDRQSRPPLTELPPGSPETPGL 260

Human   256 EGLKELMQLCWSSEPKDRPSFQECLPKTDEVFQMVENNMNAAVSTVKDFLSQLRSSNRRFSIPES 320
            |.|||||..||.|:.::|||||:|.|||:||:.:|::.::||||.||.:|||.|||.|..|..|.
Mouse   261 EKLKELMIHCWGSQSENRPSFQDCEPKTNEVYNLVKDKVDAAVSEVKHYLSQHRSSGRNLSAREP 325

Human   321 GQGGTEMDGFRRTIENQHSRNDVMVSEWLNKLNLEEPPSSVPKKCPSLTKRSRAQEEQVPQAWTA 385
            .|.|||||..|.|          |||:.|::|:||||...||.|||    ..:||:..|..|..|
Mouse   326 SQRGTEMDCPRET----------MVSKMLDRLHLEEPSGPVPGKCP----ERQAQDTSVGPATPA 376

Human   386 GTSSDSMAQPPQTPETSTFRNQMPSPTSTGTPSPGPRGNQGAERQGMNWSCRTPEPNPVTGRPLV 450
            .||||.:|..||.|.|..||...|.|..|.||.|.|:.|||..|.|..|...|| |||:||.|.:
Mouse   377 RTSSDPVAGTPQIPHTLPFRGTTPGPVFTETPGPHPQRNQGDGRHGTPWYPWTP-PNPMTGPPAL 440

Human   451 NIYNCSGVQVGD-NNYLTMQQTTALPT--WGLAPSGKGRGLQ 489
            ...|||.||:|: |:.:...:|||..:  :..|..|:|||.|
Mouse   441 VFNNCSEVQIGNYNSLVAPPRTTASSSAKYDQAQFGRGRGWQ 482

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RIPK3NP_006862.2 S_TKc 22..280 CDD:214567 185/261 (71%)
PKc_like 27..280 CDD:304357 184/256 (72%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 355..443 40/87 (46%)
RHIM 419..468 CDD:289491 23/49 (47%)
RIP homotypic interaction motif (RHIM). /evidence=ECO:0000269|PubMed:29681455 450..466 7/16 (44%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 476..518 6/16 (38%)
Ripk3NP_064339.2 Pkinase 24..284 CDD:278497 185/259 (71%)
PKc_like 28..284 CDD:304357 184/255 (72%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 312..333 11/20 (55%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 349..388 19/42 (45%)
RHIM 410..457 CDD:289491 23/47 (49%)
RIP homotypic interaction motif (RHIM). /evidence=ECO:0000269|PubMed:18442983 440..461 7/20 (35%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 462..486 9/21 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C83973640
Domainoid 1 1.000 368 1.000 Domainoid score I12653
eggNOG 1 0.900 - - E2759_KOG0192
HGNC 1 1.500 - -
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H31410
Inparanoid 1 1.050 540 1.000 Inparanoid score I11522
Isobase 1 0.950 - 0 Normalized mean entropy S5963
NCBI 1 1.000 - -
OMA 1 1.010 - - QHG34949
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0007085
OrthoInspector 1 1.000 - - oto118642
orthoMCL 1 0.900 - - OOG6_121923
Panther 1 1.100 - - LDO PTHR23257
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6895
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1818.210

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