DRSC/TRiP Functional Genomics Resources

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Protein Alignment RIPK3 and LIMK1

DIOPT Version :10

Sequence 1:NP_006862.2 Gene:RIPK3 / 11035 HGNCID:10021 Length:518 Species:Homo sapiens
Sequence 2:NP_511139.2 Gene:LIMK1 / 32207 FlyBaseID:FBgn0283712 Length:1257 Species:Drosophila melanogaster


Alignment Length:486 Identity:121/486 - (24%)
Similarity:187/486 - (38%) Gaps:107/486 - (22%)


- Green bases have known domain annotations that are detailed below.


Human    12 PAPLVSIEELENQELVGKGGFGTVFRAQHRKWGYDVAVKIVN------SKAISREVKAMASLDNE 70
            |..:....:|...|.:|:|.||.||:..||:.|..:.:|.::      .:...:||..:..||:.
  Fly   392 PQRIFRATDLVIGEKLGEGFFGKVFKVTHRQSGEVMVLKELHRADEEAQRNFIKEVAVLRLLDHR 456

Human    71 FVLRLEGVIEKVNWDQDPKPALVTKFMENGSLSGLLQSQCP-RPWPLLCRLLKEVVLGMFYLHDQ 134
            .||:..||:.|     |.|..:||:::..|.|..|:..... .|||...||.:::..||.|||..
  Fly   457 HVLKFIGVLYK-----DKKLHMVTEYVAGGCLKELIHDPAQVLPWPQRVRLARDIACGMSYLHSM 516

Human   135 NPVLLHRDLKPSNVLLDPELHVKLADFGL------------STFQGGSQSGTGSG---EPGGTLG 184
            |  ::||||...|.|:..:..|.:|||||            :...||..||..|.   .|.|||.
  Fly   517 N--IIHRDLNSMNCLVREDRSVIVADFGLARSVDAPRLPSGNMTPGGYGSGANSDAPMSPSGTLR 579

Human   185 ------------------YLAPELFVNVNRKASTASDVYSFGILMWAVLAGREVELPTEP----- 226
                              ::|||:...:  |.....||:||||::..::...|.:....|     
  Fly   580 RSKSRQRRQRYTVVGNPYWMAPEMMKGL--KYDEKVDVFSFGIMLCEIIGRVEADPDFMPRNSDF 642

Human   227 SLVYEAVCNRQ--NRPSLAELPQAGPETPGLEGLKELMQLCWSSEPKDRPSFQECLPKTDEVF-Q 288
            ||      |:|  .....|:.|         |...::..:|....|..||.|:     |..|: |
  Fly   643 SL------NQQEFREKFCAQCP---------EPFVKVAFVCCDLNPDMRPCFE-----TLHVWLQ 687

Human   289 MVENNMNAAVSTVKDFLSQLRSSNRRFSIPESGQGGTEMDGFRRTIENQHSRNDVMVSE-WLNKL 352
            .:.:::.|.....:..|.::.:....::..|.....|.........|...|..|..:|. ...|.
  Fly   688 RLADDLAADRVPPERLLHEIETFQEWYASSEDALSPTSQRSLNNLDELVKSAVDSEISPVEKEKE 752

Human   353 NLEEPPSSVPKKCPSLTKRSRAQEEQVPQAWTAGTSSDSM----------AQPPQ---TPETSTF 404
            |:...|..:||. |.|.|......|::         .|||          ||..:   ||:|.:.
  Fly   753 NMVIKPQDIPKS-PHLGKDFSPSGERL---------RDSMRARRRQRFLGAQEERRNLTPDTESK 807

Human   405 RNQMPSPTSTGTPSPGPRG-----NQGAERQ 430
            ...:........|. |.||     ..|||.|
  Fly   808 ERALKKALKKCRPF-GERGYLVDLRAGAELQ 837

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RIPK3NP_006862.2 Protein Kinases, catalytic domain 27..280 CDD:473864 82/299 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 355..443 23/94 (24%)
RHIM 448..468 CDD:463679
RIP homotypic interaction motif (RHIM). /evidence=ECO:0000269|PubMed:29681455 450..466
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 476..518
LIMK1NP_511139.2 LIM1_LIMK 33..88 CDD:188750
LIM2_LIMK 95..148 CDD:188751
PDZ_LIMK-like 169..274 CDD:467236
STKc_LIMK 407..693 CDD:271056 85/314 (27%)
Blue background indicates that the domain is not in the aligned region.

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