DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RIPK3 and Y53F4B.1

DIOPT Version :9

Sequence 1:NP_006862.2 Gene:RIPK3 / 11035 HGNCID:10021 Length:518 Species:Homo sapiens
Sequence 2:NP_497085.2 Gene:Y53F4B.1 / 190206 WormBaseID:WBGene00013149 Length:463 Species:Caenorhabditis elegans


Alignment Length:472 Identity:104/472 - (22%)
Similarity:171/472 - (36%) Gaps:158/472 - (33%)


- Green bases have known domain annotations that are detailed below.


Human    14 PLVSIE--ELENQEL-----------VGKGGFGTVFRAQHRKWGYDV----AVKIVNSKA---IS 58
            ||.|:|  :::..:|           :|.|.:..||...::  |:|.    ::|....|.   |.
 Worm     3 PLSSVELTDIKTDDLDIKWDNVQQFKLGDGSYADVFHVFYK--GHDAVLKRSIKEYTDKERENIR 65

Human    59 REVKAMASLDN-EFVLRLEGVIEKVNWDQDPKPALVTKFMENGSLSGLL--QSQCPRPWPLLCRL 120
            ||.:.:|:|:| |.|:|:.|:.|.:     |...::.::....:||.|:  ..:|...:..| |:
 Worm    66 REARVVAALNNCENVVRIYGICETL-----PFRGMIMEYCAGPNLSELVFQLDECKVKFETL-RI 124

Human   121 LKEVVLGMFYLHD-------QNPVLLHRDLKPSNVLLD--------------------------- 151
            .|       :.||       .|....|.|:|..|||:.                           
 Worm   125 FK-------WCHDLTRTLCELNVTYYHGDVKAKNVLVKERPCCCVEGIYENVKIRNTTYSLCTIC 182

Human   152 -----PELHVKLADFGLSTFQGGSQSGTGSGEPGGTLGYLAPELFVNVNRKASTASDVYSFGILM 211
                 ..|.:|:.|||:|......:...     |||..:.|||....:   .:..|:|||||.||
 Worm   183 NGVHLEHLSLKICDFGMSYEHKDKRLYN-----GGTREFSAPETIRGI---YTEKSEVYSFGHLM 239

Human   212 WAVLAGREVELPTEPSLVYEAVCNRQNRPSLAELPQAGPETPGLEGLK-----ELMQLCWSSEPK 271
            ..::.|.    |||...   ||..|      |.|.....:...:.|.|     |.::.|.::..:
 Worm   240 LVLVIGG----PTEDDC---AVGQR------AFLKMYNNKKYDMSGCKSNSICETIEWCLNNTQE 291

Human   272 DRPSFQECLPK-------------TD----------EVF-------QMVENNMNAAVSTVKDFLS 306
            .||:|::.|.|             ||          |.|       :.:..:.....::....||
 Worm   292 SRPTFKQLLSKLNSRHTHYLSLRGTDTRRLEANNEREEFLDHYRIPRKISVHRRTTTTSTCISLS 356

Human   307 QLRSSNRRFSIPESGQ-GG---TEM------------------DGFRRT--IENQHSRNDVMVSE 347
            :...||:..|:..:.. ||   .:|                  |||.:|  :|||....|.....
 Worm   357 ETSGSNQDISVTSAAYLGGPIVNQMFIADTPLASPSASRKFRNDGFEKTNYVENQLYTGDETRKP 421

Human   348 WLNKLNLEEPPSSVPKK 364
            :|.. .:..|..||.:|
 Worm   422 FLTG-GISHPGYSVMRK 437

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RIPK3NP_006862.2 S_TKc 22..280 CDD:214567 73/322 (23%)
PKc_like 27..280 CDD:304357 72/306 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 355..443 4/10 (40%)
RHIM 419..468 CDD:289491
RIP homotypic interaction motif (RHIM). /evidence=ECO:0000269|PubMed:29681455 450..466
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 476..518
Y53F4B.1NP_497085.2 PKc 29..303 CDD:270622 73/309 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0192
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.