DRSC/TRiP Functional Genomics Resources

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Protein Alignment TDRKH and hrpk-2

DIOPT Version :10

Sequence 1:NP_006853.2 Gene:TDRKH / 11022 HGNCID:11713 Length:561 Species:Homo sapiens
Sequence 2:NP_498742.1 Gene:hrpk-2 / 176123 WormBaseID:WBGene00015557 Length:886 Species:Caenorhabditis elegans


Alignment Length:241 Identity:62/241 - (25%)
Similarity:93/241 - (38%) Gaps:47/241 - (19%)


- Green bases have known domain annotations that are detailed below.


Human    14 IQKIALGLGIPASATVAYI----------LYRRYRESREERLTFVGEDDIE--IEMRVPQEAVKL 66
            |:|:....||....:.|.:          :.|...:|:.:|  |:.|:..:  :|...|....:.
 Worm   650 IEKMREVFGIGGYVSTAPLKLTGSVNSIHMARETMQSKTKR--FLDEEKFKETVEHCTPISFYRK 712

Human    67 IIGRQGANIKQLRKQTGARIDVDTEDVGDERVLLISGFPVQVCKAKAAIHQILTENTPVSE---- 127
            ||||.|.|:|.:.|.|...|........:|....|.|....:.:|...|.:|..||.|..:    
 Worm   713 IIGRCGENLKTIEKVTRTAIVFKRSFDNNEACFSIRGRTDNIKQAIEKIEEITHENQPADDDPGI 777

Human   128 -QLSVPQRSVGRIIGRGGETIRSICKASGAKITCDKESEGTLLLSRLIKISGTQKEVAAAKHLI- 190
             |:.||:..|.|:|||.|..|..|...|.||  |...:....|..:.:..||..:|.|.|.:|. 
 Worm   778 FQVRVPENMVARLIGRHGVEINRIRSESKAK--CYLNAIRGNLDDKFMVCSGGVEEAAYAAYLTK 840

Human   191 --------------------LEKVSEDEE-----LRKRIAHSAETR 211
                                |.||...|:     |:||.|...|.:
 Worm   841 VKIGIIDPKVIQFNSDDFNNLSKVKPMEDPRLVMLKKRYAERKECK 886

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TDRKHNP_006853.2 KH-I_TDRKH_rpt1 49..119 CDD:411856 18/71 (25%)
KH-I_TDRKH_rpt2 124..205 CDD:411857 30/111 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 219..262
Tudor_TDRD2 328..420 CDD:410483
hrpk-2NP_498742.1 KH 698..764 CDD:197652 17/65 (26%)
KH_1 777..838 CDD:459630 21/62 (34%)
Blue background indicates that the domain is not in the aligned region.

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