DRSC/TRiP Functional Genomics Resources

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Protein Alignment TDRKH and tag-250

DIOPT Version :10

Sequence 1:NP_006853.2 Gene:TDRKH / 11022 HGNCID:11713 Length:561 Species:Homo sapiens
Sequence 2:NP_001021188.2 Gene:tag-250 / 176113 WormBaseID:WBGene00016203 Length:626 Species:Caenorhabditis elegans


Alignment Length:399 Identity:82/399 - (20%)
Similarity:144/399 - (36%) Gaps:110/399 - (27%)


- Green bases have known domain annotations that are detailed below.


Human   185 AAKHLILEKVSED-----------EELRKRIAHSAETRVPRKQPISVRREDMTEPGGAGEPALWK 238
            ||.|| .||..|:           |:..:::..:.|.....:.||::....::            
 Worm    62 AATHL-SEKYHEEFVSKGLGRELPEDWIQQVTAAEEFEAQTRGPITILFVRLS------------ 113

Human   239 NTSSSMEPTAPLVTPPPKGGGDMAVVVSKEGSWEKPSDDSFQKSEAQAIPEMPMFEIPSPDFSFH 303
            ||||...|....|.         ..|:|.:   .:|:.|..:|.:.:...|...........|..
 Worm   114 NTSSFKRPPINSVN---------VRVISTD---REPTADELKKIKQRKENEPTEHAKTLSQQSVA 166

Human   304 ADEYLEVYVSASEHPNHFWIQIVGSRSLQLDKLVNEMTQHYENSVPE---DLTVHVGDIVA---- 361
            ..|...|.:..::.|..|:|:.:.... |.:|:...:.:.|....|.   |..|.:.:|||    
 Worm   167 LKEGSTVSIVYADSPKRFFIRALADDD-QYEKIGTTLAEIYAQETPPSALDSRVAIYEIVAGGAY 230

Human   362 APLPTNGSWYRARVLGTLENGNLDLYFVDFGDNGDCPLKDLRALR---SDFLSLPFQAIECSLAR 423
            |...:||:|:|.......::|.:..:|||.|.....|:..:|.|.   ...:|:...|.|..:  
 Worm   231 ALQDSNGTWFRVIAKQPPQSGQVMCHFVDVGVCEKFPVAAIRLLPPAVHPVMSIGSMAREVRM-- 293

Human   424 IAPSGDQWEEEALDEFDRLTHCADWKPLVAKISSYVQTGISTWPKIYLYDTSNGKKLDIGLELVH 488
                 |..|||:|    ||                                 |.|.:|:..|...
 Worm   294 -----DVSEEESL----RL---------------------------------NNKFVDLTFETKD 316

Human   489 KGYAIELP-------EDIEENRAVPDMLKDMATETDASLSTLLTETKKSSGEI-----THTLSCL 541
            .|  |::|       .|..::.::|  :.|:.:....|::..|   ||.||.:     |.|.|.:
 Worm   317 DG--IQVPINLTLSKFDSSDSESLP--VVDLQSSDGLSITEFL---KKPSGVVRLSTPTKTTSPI 374

Human   542 SLSEAASMS 550
            :.:.|::.|
 Worm   375 TPASASTSS 383

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TDRKHNP_006853.2 KH-I_TDRKH_rpt1 49..119 CDD:411856
KH-I_TDRKH_rpt2 124..205 CDD:411857 8/30 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 219..262 6/42 (14%)
Tudor_TDRD2 328..420 CDD:410483 25/101 (25%)
tag-250NP_001021188.2 TUDOR 169..284 CDD:425754 27/115 (23%)
TUDOR 413..522 CDD:425754
Blue background indicates that the domain is not in the aligned region.

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