DRSC/TRiP Functional Genomics Resources

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Protein Alignment COPS5 and eIF3f2

DIOPT Version :10

Sequence 1:NP_006828.2 Gene:COPS5 / 10987 HGNCID:2240 Length:334 Species:Homo sapiens
Sequence 2:NP_610210.2 Gene:eIF3f2 / 35547 FlyBaseID:FBgn0033069 Length:286 Species:Drosophila melanogaster


Alignment Length:94 Identity:21/94 - (22%)
Similarity:40/94 - (42%) Gaps:12/94 - (12%)


- Green bases have known domain annotations that are detailed below.


Human    70 RSGGNLEVMGLMLGKVDGETMIIMDSFALP-VEGTET-RVNAQAAAYEYMAAYIENAKQVGRLEN 132
            |..|:.:|||.:||:.....:.|.:.|.:| .|.:|. |::...|   |.:..:|........|.
  Fly    29 RPKGDNQVMGTLLGRNKEGHIEITNCFTVPHKEHSENKRIDLDMA---YASEVLELNMFAYPNER 90

Human   133 AIGWYHSHPGYGCWLSGIDVSTQMLNQQF 161
            .:||:       |....:..|..:::..:
  Fly    91 VLGWF-------CTGKSVSRSASLIHDYY 112

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
COPS5NP_006828.2 MPN_RPN11_CSN5 44..314 CDD:163700 21/94 (22%)
JAMM motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU01182 138..151 1/12 (8%)
eIF3f2NP_610210.2 MPN_eIF3f 12..280 CDD:163695 21/94 (22%)

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