DRSC/TRiP Functional Genomics Resources

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Protein Alignment RAB32 and Rab35

DIOPT Version :10

Sequence 1:NP_006825.1 Gene:RAB32 / 10981 HGNCID:9772 Length:225 Species:Homo sapiens
Sequence 2:NP_608373.1 Gene:Rab35 / 33014 FlyBaseID:FBgn0031090 Length:201 Species:Drosophila melanogaster


Alignment Length:212 Identity:72/212 - (33%)
Similarity:115/212 - (54%) Gaps:26/212 - (12%)


- Green bases have known domain annotations that are detailed below.


Human    23 EHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQER 87
            :||||:|:||:.||||:|::.|:....||..|..||||||.::.::.:... |:||:||.|||||
  Fly     6 DHLFKLLIIGDSGVGKSSLLIRFSDDTFSGSYITTIGVDFKIRTVDIEGMR-VKLQIWDTAGQER 69

Human    88 FGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANKCDQ----- 147
            |..:|..||:...|..||:|::...:|..|.:|..::.:     |...:..||:.||.|.     
  Fly    70 FRTITSTYYRGTHGVIVVYDVTNGESFANVRRWLEEIQN-----NCDVVKKVLVGNKNDDPDRKV 129

Human   148 --NKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKILVNH--QSFPNEENDVDK 208
              .:|:.:...|:|        ...||||||||||:|.....:..::| :|  ::.|||:.. |.
  Fly   130 VITEDAQRFAKQMD--------IELFETSAKDNINVENMFLSITRQVL-DHKLRTSPNEQQK-DT 184

Human   209 IKLDQETLRAENKSQCC 225
            :.| :...:.....:||
  Fly   185 LHL-KPNPKGSKGGKCC 200

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RAB32NP_006825.1 Rab32_Rab38 26..224 CDD:206692 68/206 (33%)
Switch 1. /evidence=ECO:0000269|PubMed:24856514, ECO:0007744|PDB:4CYM, ECO:0007744|PDB:4CZ2 48..62 7/13 (54%)
Switch 2. /evidence=ECO:0000269|PubMed:24856514, ECO:0007744|PDB:4CYM, ECO:0007744|PDB:4CZ2 84..97 7/12 (58%)
PKA-RII subunit binding domain 178..197 6/20 (30%)
Rab35NP_608373.1 Rab35 3..201 CDD:133310 72/212 (34%)

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