DRSC/TRiP Functional Genomics Resources

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Protein Alignment RAB40B and Rab10

DIOPT Version :10

Sequence 1:NP_006813.1 Gene:RAB40B / 10966 HGNCID:18284 Length:278 Species:Homo sapiens
Sequence 2:NP_523419.1 Gene:Rab10 / 33025 FlyBaseID:FBgn0015789 Length:204 Species:Drosophila melanogaster


Alignment Length:168 Identity:79/168 - (47%)
Similarity:105/168 - (62%) Gaps:1/168 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     9 RAYDFLLKFLLVGDSDVGKGEILASLQDGAAESPYGHPAGIDYKTTTILLDGRRVKLQLWDTSGQ 73
            :.||.|.|.||:|||.|||..||....|.|..|.:....|||:|..|:.|.|:::|||:|||:||
  Fly     4 KTYDLLFKLLLIGDSGVGKTCILFRFSDDAFTSTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQ 68

Human    74 GRFCTIFRSYSRGAQGVILVYDIANRWSFDGIDRWIKEIDEHA-PGVPKILVGNRLHLAFKRQVP 137
            .||.||..||.|||.|::|||||.|..||:.|.:|::.||||| ..|.|:::||:..:..||.|.
  Fly    69 ERFHTITTSYYRGAMGIMLVYDITNEKSFENIVKWLRNIDEHANEDVEKMILGNKCDMTDKRVVN 133

Human   138 TEQAQAYAERLGVTFFEVSPLCNFNITESFTELARIVL 175
            .|:.:|.|...|:.|.|.|...|.||..:|.|||..:|
  Fly   134 KERGEAIAREHGIRFMETSAKSNINIERAFCELAEAIL 171

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RAB40BNP_006813.1 Rab40 9..278 CDD:133321 79/168 (47%)
Switch-I. /evidence=ECO:0000255|PROSITE-ProRule:PRU00753 41..49 1/7 (14%)
Switch-II. /evidence=ECO:0000255|PROSITE-ProRule:PRU00753 72..88 10/15 (67%)
SOCS_Rab40 187..229 CDD:239711
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 242..278
Rab10NP_523419.1 Rab8_Rab10_Rab13_like 7..173 CDD:206659 78/165 (47%)
Blue background indicates that the domain is not in the aligned region.

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