DRSC/TRiP Functional Genomics Resources

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Protein Alignment RAB40B and Rab9Fb

DIOPT Version :10

Sequence 1:NP_006813.1 Gene:RAB40B / 10966 HGNCID:18284 Length:278 Species:Homo sapiens
Sequence 2:NP_727472.1 Gene:Rab9Fb / 32029 FlyBaseID:FBgn0052670 Length:214 Species:Drosophila melanogaster


Alignment Length:179 Identity:69/179 - (38%)
Similarity:97/179 - (54%) Gaps:8/179 - (4%)


- Green bases have known domain annotations that are detailed below.


Human    11 YDFLLKFLLVGDSDVGKGEILASLQDGAAESPYGHPAGIDYKTTTILLDGRRVKLQLWDTSGQGR 75
            ||:|.|.|::||..|||..:|....|......:....|:|::...:.|.||.|.||:|||:|..|
  Fly     4 YDYLFKILVLGDIGVGKSCLLMRFSDNRFTEKHVCTVGMDFRVRNVELAGRMVMLQIWDTAGDER 68

Human    76 FCTIFRSYSRGAQGVILVYDIANRWSFDGIDRWIKEIDE-HAPGVPKILVGNRLHLAFKRQVPTE 139
            |.::..||.|||.|::|||||.:..||..||.|:|||.. .:..|..:||||:......|||..|
  Fly    69 FKSLLPSYYRGAHGILLVYDITSSKSFRNIDGWLKEIRRMSSESVNVMLVGNKCDDLDNRQVRME 133

Human   140 QAQAYAERLGVTFFEVSPLCNFNITESFTELA-----RIVLLRHGMDRL 183
            |...||....:.|:|||.....|:.:.|..|:     |:|:  |..:||
  Fly   134 QGFNYANHRALGFYEVSAKSGANVNDVFNMLSVGIYNRLVI--HTPNRL 180

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RAB40BNP_006813.1 Rab40 9..278 CDD:133321 69/179 (39%)
Switch-I. /evidence=ECO:0000255|PROSITE-ProRule:PRU00753 41..49 0/7 (0%)
Switch-II. /evidence=ECO:0000255|PROSITE-ProRule:PRU00753 72..88 7/15 (47%)
SOCS_Rab40 187..229 CDD:239711
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 242..278
Rab9FbNP_727472.1 Rab 8..165 CDD:206640 60/156 (38%)
Blue background indicates that the domain is not in the aligned region.

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