DRSC/TRiP Functional Genomics Resources

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Protein Alignment RAB40B and RabX2

DIOPT Version :10

Sequence 1:NP_006813.1 Gene:RAB40B / 10966 HGNCID:18284 Length:278 Species:Homo sapiens
Sequence 2:NP_572627.1 Gene:RabX2 / 31971 FlyBaseID:FBgn0030200 Length:195 Species:Drosophila melanogaster


Alignment Length:169 Identity:68/169 - (40%)
Similarity:91/169 - (53%) Gaps:1/169 - (0%)


- Green bases have known domain annotations that are detailed below.


Human    11 YDFLLKFLLVGDSDVGKGEILASLQDGAAESPYGHPAGIDYKTTTILLDGRRVKLQLWDTSGQGR 75
            :|:|.|.|::|||.|||..:|....|......|....|||.|..::.|..|.:.||:|||||..|
  Fly     4 FDYLFKVLVLGDSGVGKSCLLMRFSDDRFTEKYLRTMGIDVKARSVELVSRVMMLQVWDTSGDKR 68

Human    76 FCTIFRSYSRGAQGVILVYDIANRWSFDGIDRWIKEIDEHAPG-VPKILVGNRLHLAFKRQVPTE 139
            |.::..|..|.|.|::|||||.:..||..||.|:|||....|. |..:||||:......|||..|
  Fly    69 FNSLMPSNYRSAHGILLVYDITSSKSFQNIDGWMKEIRRMCPDKVTVLLVGNKSDDPNHRQVSME 133

Human   140 QAQAYAERLGVTFFEVSPLCNFNITESFTELARIVLLRH 178
            |...||.|..:.|.|||.....|:.:.|:.||..:..|:
  Fly   134 QGFNYAHRGALGFEEVSAKSGMNVYDIFSSLAMDIYHRY 172

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RAB40BNP_006813.1 Rab40 9..278 CDD:133321 68/169 (40%)
Switch-I. /evidence=ECO:0000255|PROSITE-ProRule:PRU00753 41..49 1/7 (14%)
Switch-II. /evidence=ECO:0000255|PROSITE-ProRule:PRU00753 72..88 5/15 (33%)
SOCS_Rab40 187..229 CDD:239711
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 242..278
RabX2NP_572627.1 Rab 8..165 CDD:206640 63/156 (40%)
Blue background indicates that the domain is not in the aligned region.

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