DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment LMAN2 and CG5510

DIOPT Version :10

Sequence 1:NP_006807.1 Gene:LMAN2 / 10960 HGNCID:16986 Length:356 Species:Homo sapiens
Sequence 2:NP_651224.1 Gene:CG5510 / 42872 FlyBaseID:FBgn0039160 Length:329 Species:Drosophila melanogaster


Alignment Length:332 Identity:159/332 - (47%)
Similarity:218/332 - (65%) Gaps:21/332 - (6%)


- Green bases have known domain annotations that are detailed below.


Human    33 LFLLLLLGS---VTADITDGNSEHLKREHSLIKPYQGVGSSSMPLWDFQGSTMLTSQYVRLTPDE 94
            |.||.||.:   |..:......:::||||||::|:|||| ..:|.|||.|:||:||.|:|||||.
  Fly    11 LALLALLVAPFVVLGEDMPREPDYMKREHSLVRPFQGVG-VILPHWDFLGNTMVTSNYIRLTPDL 74

Human    95 RSKEGSIWNHQPCFLKDWEMHVHFKVHGTGKKNLHGDGIALWYTRDRLVPGPVFGSKDNFHGLAI 159
            :||.|::||:.|...::||:||.|||||.|.: |.|||.|:|||::|:..||||||||:|.||||
  Fly    75 QSKSGALWNYSPVMTRNWEVHVGFKVHGKGTE-LFGDGFAIWYTKERMQTGPVFGSKDHFSGLAI 138

Human   160 FLDTYPN-DETTERVFPYISVMVNNGSLSYDHSKDGRWTELAGCTADFRNRDHDTFLAVRYSRGR 223
            .||||.| :.......||:|.||||||.||||.:||..|:||||...|||.:::|.:::||....
  Fly   139 ILDTYSNHNGPHNHQHPYLSAMVNNGSWSYDHDRDGTHTQLAGCEVRFRNVEYETLVSIRYENDI 203

Human   224 LTVMTDLEDKNEWKNCIDITGVRLPTGYYFGASAGTGDLSDNHDIISMKLF--QLMVEHTPDEES 286
            |:|.||||::||||||..:..|.|||||:||.||.||||||||||.|.|.:  .|.|.|   :|.
  Fly   204 LSVSTDLENRNEWKNCFVVANVELPTGYHFGMSATTGDLSDNHDIHSFKFYDLDLNVNH---DEI 265

Human   287 IDWTKIEPSVNFLKSPKDNVDDPTGNFRSGPLTGWRVFLLLLCALLGIVVCAVVG--AVVFQKRQ 349
            |..:.|.|:....:.|:::.:||    :.| ::..::|.:||..   :||.|.|.  |:.:.|.:
  Fly   266 IRRSNIIPNAKTFEPPREHKEDP----KPG-MSNAKIFFILLFV---VVVAAAVAIFAISYFKDR 322

Human   350 ERNKRFY 356
            ...||||
  Fly   323 NARKRFY 329

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LMAN2NP_006807.1 lectin_VIP36_VIPL 53..301 CDD:173889 136/250 (54%)
CG5510NP_651224.1 lectin_VIP36_VIPL 34..280 CDD:173889 136/250 (54%)

Return to query results.
Submit another query.